Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2696 and HP15_2697 are separated by 327 nucleotides HP15_2697 and HP15_2698 are separated by 17 nucleotides HP15_2698 and HP15_2699 are separated by 12 nucleotides
HP15_2696: HP15_2696 - phenylacetate-CoA ligase, at 2,848,384 to 2,849,694
_2696
HP15_2697: HP15_2697 - phenylacetate-CoA oxygenase, PaaG subunit, at 2,850,022 to 2,851,014
_2697
HP15_2698: HP15_2698 - phenylacetate-CoA oxygenase, PaaH subunit, at 2,851,032 to 2,851,313
_2698
HP15_2699: HP15_2699 - phenylacetate-CoA oxygenase, PaaI subunit, at 2,851,326 to 2,852,090
_2699
Position (kb)
2850
2851
2852 Strain fitness (log2 ratio)
-2
-1
0
1 at 2849.046 kb on + strand, within HP15_2696 at 2849.100 kb on + strand, within HP15_2696 at 2849.134 kb on - strand, within HP15_2696 at 2849.254 kb on + strand, within HP15_2696 at 2849.256 kb on - strand, within HP15_2696 at 2849.303 kb on + strand, within HP15_2696 at 2849.311 kb on - strand, within HP15_2696 at 2849.491 kb on + strand, within HP15_2696 at 2849.545 kb on + strand, within HP15_2696 at 2849.616 kb on + strand at 2849.634 kb on - strand at 2849.689 kb on - strand at 2849.716 kb on - strand at 2849.814 kb on - strand at 2849.976 kb on + strand at 2849.985 kb on + strand at 2849.993 kb on - strand at 2850.001 kb on - strand at 2850.065 kb on + strand at 2850.180 kb on + strand, within HP15_2697 at 2850.241 kb on - strand, within HP15_2697 at 2850.305 kb on + strand, within HP15_2697 at 2850.323 kb on - strand, within HP15_2697 at 2850.923 kb on - strand at 2850.967 kb on + strand at 2851.100 kb on - strand, within HP15_2698 at 2851.178 kb on - strand, within HP15_2698 at 2851.307 kb on + strand at 2851.315 kb on - strand at 2851.315 kb on - strand at 2851.356 kb on + strand at 2851.453 kb on + strand, within HP15_2699 at 2851.592 kb on + strand, within HP15_2699 at 2851.939 kb on - strand, within HP15_2699 at 2851.959 kb on - strand, within HP15_2699 at 2851.988 kb on + strand, within HP15_2699
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,849,046 + HP15_2696 0.50 +0.2 2,849,100 + HP15_2696 0.55 +0.4 2,849,134 - HP15_2696 0.57 +0.2 2,849,254 + HP15_2696 0.66 +1.5 2,849,256 - HP15_2696 0.67 -0.2 2,849,303 + HP15_2696 0.70 -0.8 2,849,311 - HP15_2696 0.71 -0.3 2,849,491 + HP15_2696 0.84 -1.3 2,849,545 + HP15_2696 0.89 -0.4 2,849,616 + +0.2 2,849,634 - -1.8 2,849,689 - +0.3 2,849,716 - -0.5 2,849,814 - +0.3 2,849,976 + -0.4 2,849,985 + -0.1 2,849,993 - +1.3 2,850,001 - -0.3 2,850,065 + -1.0 2,850,180 + HP15_2697 0.16 +0.1 2,850,241 - HP15_2697 0.22 +0.4 2,850,305 + HP15_2697 0.28 +1.4 2,850,323 - HP15_2697 0.30 +0.7 2,850,923 - +0.1 2,850,967 + -0.3 2,851,100 - HP15_2698 0.24 +1.6 2,851,178 - HP15_2698 0.52 +0.5 2,851,307 + -0.4 2,851,315 - +0.4 2,851,315 - +1.1 2,851,356 + +1.1 2,851,453 + HP15_2699 0.17 +1.1 2,851,592 + HP15_2699 0.35 +1.4 2,851,939 - HP15_2699 0.80 +1.2 2,851,959 - HP15_2699 0.83 -0.3 2,851,988 + HP15_2699 0.87 +0.6
Or see this region's nucleotide sequence