Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2450 and HP15_2451 are separated by 40 nucleotides HP15_2451 and HP15_2452 overlap by 4 nucleotides HP15_2452 and HP15_2453 are separated by 2 nucleotides
HP15_2450: HP15_2450 - conserved hypothetical protein, at 2,586,472 to 2,590,227
_2450
HP15_2451: HP15_2451 - ribonuclease, Rne/Rng family, at 2,590,268 to 2,591,749
_2451
HP15_2452: HP15_2452 - Maf-like protein, at 2,591,746 to 2,592,351
_2452
HP15_2453: HP15_2453 - rod shape-determining protein MreD, at 2,592,354 to 2,592,830
_2453
Position (kb)
2590
2591
2592 Strain fitness (log2 ratio)
-2
-1
0
1 at 2589.334 kb on + strand, within HP15_2450 at 2589.342 kb on - strand, within HP15_2450 at 2589.482 kb on + strand, within HP15_2450 at 2589.484 kb on + strand, within HP15_2450 at 2589.557 kb on + strand, within HP15_2450 at 2589.557 kb on + strand, within HP15_2450 at 2589.668 kb on + strand, within HP15_2450 at 2589.813 kb on + strand, within HP15_2450 at 2589.813 kb on + strand, within HP15_2450 at 2589.866 kb on - strand at 2589.876 kb on - strand at 2590.243 kb on - strand at 2590.279 kb on - strand at 2590.284 kb on - strand at 2590.421 kb on + strand, within HP15_2451 at 2590.537 kb on + strand, within HP15_2451 at 2590.850 kb on - strand, within HP15_2451 at 2590.903 kb on - strand, within HP15_2451 at 2591.166 kb on - strand, within HP15_2451 at 2591.404 kb on + strand, within HP15_2451 at 2591.412 kb on - strand, within HP15_2451 at 2592.003 kb on - strand, within HP15_2452 at 2592.003 kb on - strand, within HP15_2452 at 2592.008 kb on - strand, within HP15_2452 at 2592.031 kb on + strand, within HP15_2452 at 2592.073 kb on + strand, within HP15_2452 at 2592.179 kb on - strand, within HP15_2452 at 2592.205 kb on + strand, within HP15_2452 at 2592.360 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,589,334 + HP15_2450 0.76 +0.5 2,589,342 - HP15_2450 0.76 +0.3 2,589,482 + HP15_2450 0.80 -0.1 2,589,484 + HP15_2450 0.80 +0.6 2,589,557 + HP15_2450 0.82 +0.7 2,589,557 + HP15_2450 0.82 +1.5 2,589,668 + HP15_2450 0.85 +0.8 2,589,813 + HP15_2450 0.89 +0.8 2,589,813 + HP15_2450 0.89 +0.6 2,589,866 - +0.6 2,589,876 - +0.4 2,590,243 - -0.5 2,590,279 - -2.1 2,590,284 - -0.5 2,590,421 + HP15_2451 0.10 -1.5 2,590,537 + HP15_2451 0.18 -0.5 2,590,850 - HP15_2451 0.39 -1.5 2,590,903 - HP15_2451 0.43 -2.2 2,591,166 - HP15_2451 0.61 -1.8 2,591,404 + HP15_2451 0.77 -0.7 2,591,412 - HP15_2451 0.77 -1.5 2,592,003 - HP15_2452 0.42 +0.1 2,592,003 - HP15_2452 0.42 -0.6 2,592,008 - HP15_2452 0.43 +0.2 2,592,031 + HP15_2452 0.47 +0.6 2,592,073 + HP15_2452 0.54 +1.1 2,592,179 - HP15_2452 0.71 -0.1 2,592,205 + HP15_2452 0.76 +0.5 2,592,360 - -0.5
Or see this region's nucleotide sequence