Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2323 and HP15_2324 overlap by 20 nucleotides HP15_2324 and HP15_2325 overlap by 4 nucleotides HP15_2325 and HP15_2326 overlap by 8 nucleotides
HP15_2323: HP15_2323 - flagellum-specific ATP synthase FliI, at 2,441,571 to 2,442,965
_2323
HP15_2324: HP15_2324 - flagellar assembly protein H, at 2,442,946 to 2,443,842
_2324
HP15_2325: HP15_2325 - flagellar motor switch protein G, at 2,443,839 to 2,444,882
_2325
HP15_2326: HP15_2326 - flagellar MS-ring protein, at 2,444,875 to 2,446,584
_2326
Position (kb)
2443
2444
2445 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2442.844 kb on - strand at 2442.904 kb on - strand at 2442.961 kb on - strand at 2443.080 kb on - strand, within HP15_2324 at 2443.134 kb on - strand, within HP15_2324 at 2443.209 kb on + strand, within HP15_2324 at 2443.281 kb on + strand, within HP15_2324 at 2443.316 kb on + strand, within HP15_2324 at 2443.380 kb on + strand, within HP15_2324 at 2443.380 kb on + strand, within HP15_2324 at 2443.385 kb on + strand, within HP15_2324 at 2443.385 kb on + strand, within HP15_2324 at 2443.402 kb on + strand, within HP15_2324 at 2443.402 kb on + strand, within HP15_2324 at 2443.410 kb on - strand, within HP15_2324 at 2443.415 kb on - strand, within HP15_2324 at 2443.432 kb on + strand, within HP15_2324 at 2443.480 kb on + strand, within HP15_2324 at 2443.502 kb on + strand, within HP15_2324 at 2443.556 kb on + strand, within HP15_2324 at 2443.556 kb on + strand, within HP15_2324 at 2443.557 kb on + strand, within HP15_2324 at 2443.597 kb on + strand, within HP15_2324 at 2443.628 kb on + strand, within HP15_2324 at 2443.650 kb on + strand, within HP15_2324 at 2443.708 kb on - strand, within HP15_2324 at 2443.717 kb on - strand, within HP15_2324 at 2443.870 kb on - strand at 2443.896 kb on - strand at 2443.927 kb on + strand at 2443.955 kb on - strand, within HP15_2325 at 2444.063 kb on + strand, within HP15_2325 at 2444.071 kb on - strand, within HP15_2325 at 2444.075 kb on + strand, within HP15_2325 at 2444.113 kb on + strand, within HP15_2325 at 2444.121 kb on - strand, within HP15_2325 at 2444.136 kb on + strand, within HP15_2325 at 2444.144 kb on - strand, within HP15_2325 at 2444.691 kb on + strand, within HP15_2325 at 2444.736 kb on - strand, within HP15_2325 at 2444.851 kb on + strand at 2444.966 kb on + strand at 2444.966 kb on + strand at 2445.025 kb on - strand at 2445.040 kb on - strand at 2445.113 kb on + strand, within HP15_2326 at 2445.126 kb on - strand, within HP15_2326 at 2445.214 kb on - strand, within HP15_2326 at 2445.224 kb on - strand, within HP15_2326 at 2445.224 kb on - strand, within HP15_2326 at 2445.320 kb on + strand, within HP15_2326 at 2445.443 kb on + strand, within HP15_2326 at 2445.651 kb on + strand, within HP15_2326 at 2445.659 kb on - strand, within HP15_2326 at 2445.686 kb on - strand, within HP15_2326 at 2445.778 kb on - strand, within HP15_2326 at 2445.846 kb on + strand, within HP15_2326
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,442,844 - -1.5 2,442,904 - -0.6 2,442,961 - +0.3 2,443,080 - HP15_2324 0.15 +0.6 2,443,134 - HP15_2324 0.21 -2.5 2,443,209 + HP15_2324 0.29 -1.5 2,443,281 + HP15_2324 0.37 -1.4 2,443,316 + HP15_2324 0.41 +1.3 2,443,380 + HP15_2324 0.48 -0.8 2,443,380 + HP15_2324 0.48 -0.4 2,443,385 + HP15_2324 0.49 -1.4 2,443,385 + HP15_2324 0.49 -1.2 2,443,402 + HP15_2324 0.51 -2.0 2,443,402 + HP15_2324 0.51 -1.8 2,443,410 - HP15_2324 0.52 +0.4 2,443,415 - HP15_2324 0.52 -2.0 2,443,432 + HP15_2324 0.54 -1.3 2,443,480 + HP15_2324 0.60 -1.2 2,443,502 + HP15_2324 0.62 -2.2 2,443,556 + HP15_2324 0.68 -0.7 2,443,556 + HP15_2324 0.68 -2.4 2,443,557 + HP15_2324 0.68 -1.4 2,443,597 + HP15_2324 0.73 -1.0 2,443,628 + HP15_2324 0.76 -1.3 2,443,650 + HP15_2324 0.78 -2.6 2,443,708 - HP15_2324 0.85 -1.2 2,443,717 - HP15_2324 0.86 -1.4 2,443,870 - -0.1 2,443,896 - -0.3 2,443,927 + -1.5 2,443,955 - HP15_2325 0.11 -2.6 2,444,063 + HP15_2325 0.21 -0.5 2,444,071 - HP15_2325 0.22 -2.2 2,444,075 + HP15_2325 0.23 -1.8 2,444,113 + HP15_2325 0.26 -2.2 2,444,121 - HP15_2325 0.27 -1.0 2,444,136 + HP15_2325 0.28 -2.5 2,444,144 - HP15_2325 0.29 -1.6 2,444,691 + HP15_2325 0.82 -2.2 2,444,736 - HP15_2325 0.86 -2.5 2,444,851 + -2.3 2,444,966 + -1.3 2,444,966 + -3.6 2,445,025 - -1.2 2,445,040 - -1.8 2,445,113 + HP15_2326 0.14 -1.6 2,445,126 - HP15_2326 0.15 -0.5 2,445,214 - HP15_2326 0.20 -1.8 2,445,224 - HP15_2326 0.20 -2.7 2,445,224 - HP15_2326 0.20 -1.0 2,445,320 + HP15_2326 0.26 -0.9 2,445,443 + HP15_2326 0.33 -1.1 2,445,651 + HP15_2326 0.45 -1.4 2,445,659 - HP15_2326 0.46 -2.0 2,445,686 - HP15_2326 0.47 -1.0 2,445,778 - HP15_2326 0.53 -1.3 2,445,846 + HP15_2326 0.57 -3.3
Or see this region's nucleotide sequence