Strain Fitness in Marinobacter adhaerens HP15 around HP15_196

Experiment: m.b. Choline chloride 358.1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_194 and HP15_195 are separated by 260 nucleotidesHP15_195 and HP15_196 overlap by 2 nucleotidesHP15_196 and HP15_tRNA1 are separated by 549 nucleotidesHP15_tRNA1 and HP15_197 are separated by 193 nucleotides HP15_194: HP15_194 - mercuric ion reductase, at 182,043 to 183,449 _194 HP15_195: HP15_195 - hypothetical protein, at 183,710 to 183,814 _195 HP15_196: HP15_196 - cytochrome C-like protein, at 183,813 to 184,241 _196 HP15_tRNA1: HP15_tRNA1 - tRNA-Arg, at 184,791 to 184,867 _tRNA1 HP15_197: HP15_197 - YaeQ family protein, at 185,061 to 185,606 _197 Position (kb) 183 184 185Strain fitness (log2 ratio) -3 -2 -1 0 1at 182.879 kb on - strand, within HP15_194at 182.924 kb on - strand, within HP15_194at 182.964 kb on + strand, within HP15_194at 183.082 kb on - strand, within HP15_194at 183.138 kb on + strand, within HP15_194at 183.143 kb on + strand, within HP15_194at 183.151 kb on - strand, within HP15_194at 183.151 kb on - strand, within HP15_194at 183.151 kb on - strand, within HP15_194at 183.151 kb on - strand, within HP15_194at 183.151 kb on - strand, within HP15_194at 183.153 kb on - strand, within HP15_194at 183.157 kb on + strand, within HP15_194at 183.165 kb on - strand, within HP15_194at 183.235 kb on - strand, within HP15_194at 183.245 kb on + strand, within HP15_194at 183.256 kb on + strand, within HP15_194at 183.327 kb on + strandat 183.426 kb on - strandat 183.471 kb on - strandat 183.662 kb on + strandat 183.662 kb on + strandat 183.662 kb on + strandat 183.662 kb on + strandat 183.670 kb on - strandat 183.670 kb on - strandat 183.670 kb on - strandat 183.698 kb on + strandat 183.790 kb on - strand, within HP15_195at 183.792 kb on + strand, within HP15_195at 184.038 kb on + strand, within HP15_196at 184.092 kb on - strand, within HP15_196at 184.246 kb on + strandat 184.256 kb on - strandat 184.394 kb on + strandat 184.394 kb on + strandat 184.402 kb on - strandat 184.425 kb on + strandat 184.432 kb on + strandat 184.448 kb on - strandat 184.613 kb on + strandat 184.673 kb on - strandat 184.695 kb on - strandat 185.059 kb on + strandat 185.064 kb on + strandat 185.072 kb on - strandat 185.072 kb on - strandat 185.089 kb on - strandat 185.155 kb on - strand, within HP15_197at 185.185 kb on + strand, within HP15_197at 185.186 kb on + strand, within HP15_197at 185.187 kb on - strand, within HP15_197

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM
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182,879 - HP15_194 0.59 -1.6
182,924 - HP15_194 0.63 -3.2
182,964 + HP15_194 0.65 +0.3
183,082 - HP15_194 0.74 -0.1
183,138 + HP15_194 0.78 -0.4
183,143 + HP15_194 0.78 +0.5
183,151 - HP15_194 0.79 +0.6
183,151 - HP15_194 0.79 +0.6
183,151 - HP15_194 0.79 +0.8
183,151 - HP15_194 0.79 -1.0
183,151 - HP15_194 0.79 -0.2
183,153 - HP15_194 0.79 -2.3
183,157 + HP15_194 0.79 +0.3
183,165 - HP15_194 0.80 -0.6
183,235 - HP15_194 0.85 -2.9
183,245 + HP15_194 0.85 -0.0
183,256 + HP15_194 0.86 -0.4
183,327 + +1.1
183,426 - -0.9
183,471 - +0.6
183,662 + +0.4
183,662 + -1.6
183,662 + +1.7
183,662 + -0.1
183,670 - -3.0
183,670 - -1.2
183,670 - -0.0
183,698 + +0.8
183,790 - HP15_195 0.76 +1.0
183,792 + HP15_195 0.78 +0.7
184,038 + HP15_196 0.52 -0.4
184,092 - HP15_196 0.65 -1.7
184,246 + +0.3
184,256 - +0.3
184,394 + +0.4
184,394 + -0.1
184,402 - -1.9
184,425 + +0.7
184,432 + -0.8
184,448 - -0.7
184,613 + +0.1
184,673 - +0.6
184,695 - +0.4
185,059 + +1.0
185,064 + -0.1
185,072 - -1.1
185,072 - -0.2
185,089 - +0.3
185,155 - HP15_197 0.17 -0.2
185,185 + HP15_197 0.23 +0.4
185,186 + HP15_197 0.23 +0.8
185,187 - HP15_197 0.23 -1.6

Or see this region's nucleotide sequence