Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1203 and HP15_1204 are separated by 252 nucleotides HP15_1204 and HP15_1205 are separated by 23 nucleotides
HP15_1203: HP15_1203 - methyltransferase, at 1,243,978 to 1,245,054
_1203
HP15_1204: HP15_1204 - conserved hypothetical protein, at 1,245,307 to 1,246,170
_1204
HP15_1205: HP15_1205 - FOG: ankyrin repeat protein, at 1,246,194 to 1,248,944
_1205
Position (kb)
1245
1246
1247 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1244.357 kb on - strand, within HP15_1203 at 1244.425 kb on - strand, within HP15_1203 at 1244.446 kb on + strand, within HP15_1203 at 1244.554 kb on + strand, within HP15_1203 at 1244.944 kb on - strand, within HP15_1203 at 1244.944 kb on - strand, within HP15_1203 at 1244.986 kb on + strand at 1245.013 kb on + strand at 1245.083 kb on - strand at 1245.143 kb on + strand at 1245.205 kb on + strand at 1245.213 kb on - strand at 1245.259 kb on - strand at 1245.340 kb on + strand at 1245.529 kb on - strand, within HP15_1204 at 1245.576 kb on + strand, within HP15_1204 at 1245.604 kb on - strand, within HP15_1204 at 1245.645 kb on + strand, within HP15_1204 at 1245.874 kb on + strand, within HP15_1204 at 1245.884 kb on + strand, within HP15_1204 at 1245.892 kb on - strand, within HP15_1204 at 1245.892 kb on - strand, within HP15_1204 at 1245.939 kb on + strand, within HP15_1204 at 1245.961 kb on - strand, within HP15_1204 at 1246.048 kb on - strand, within HP15_1204 at 1246.183 kb on + strand at 1246.418 kb on + strand at 1246.512 kb on - strand, within HP15_1205 at 1246.562 kb on + strand, within HP15_1205 at 1246.668 kb on + strand, within HP15_1205 at 1246.785 kb on - strand, within HP15_1205 at 1246.827 kb on + strand, within HP15_1205 at 1246.909 kb on + strand, within HP15_1205 at 1246.924 kb on + strand, within HP15_1205 at 1246.945 kb on + strand, within HP15_1205 at 1246.980 kb on + strand, within HP15_1205 at 1246.988 kb on - strand, within HP15_1205
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 1,244,357 - HP15_1203 0.35 -0.4 1,244,425 - HP15_1203 0.42 +0.3 1,244,446 + HP15_1203 0.43 +0.7 1,244,554 + HP15_1203 0.53 +0.0 1,244,944 - HP15_1203 0.90 +0.3 1,244,944 - HP15_1203 0.90 -0.2 1,244,986 + -1.4 1,245,013 + +2.3 1,245,083 - -1.4 1,245,143 + +0.0 1,245,205 + -1.8 1,245,213 - +0.3 1,245,259 - -1.2 1,245,340 + +1.7 1,245,529 - HP15_1204 0.26 +0.4 1,245,576 + HP15_1204 0.31 +0.9 1,245,604 - HP15_1204 0.34 +0.4 1,245,645 + HP15_1204 0.39 +0.6 1,245,874 + HP15_1204 0.66 -0.1 1,245,884 + HP15_1204 0.67 +1.0 1,245,892 - HP15_1204 0.68 +0.7 1,245,892 - HP15_1204 0.68 -0.7 1,245,939 + HP15_1204 0.73 +0.0 1,245,961 - HP15_1204 0.76 +0.5 1,246,048 - HP15_1204 0.86 +1.2 1,246,183 + -2.6 1,246,418 + -0.8 1,246,512 - HP15_1205 0.12 -0.6 1,246,562 + HP15_1205 0.13 -1.0 1,246,668 + HP15_1205 0.17 +0.2 1,246,785 - HP15_1205 0.21 -0.2 1,246,827 + HP15_1205 0.23 -2.2 1,246,909 + HP15_1205 0.26 -1.4 1,246,924 + HP15_1205 0.27 -1.2 1,246,945 + HP15_1205 0.27 +0.6 1,246,980 + HP15_1205 0.29 +1.9 1,246,988 - HP15_1205 0.29 +0.5
Or see this region's nucleotide sequence