Experiment: MoLS4 minimal media with D,L-Cysteine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2795 and DvMF_2796 are separated by 528 nucleotides DvMF_2796 and DvMF_2797 are separated by 0 nucleotides DvMF_2797 and DvMF_2798 are separated by 64 nucleotides
DvMF_2795: DvMF_2795 - peptidase M29 aminopeptidase II (RefSeq), at 3,537,983 to 3,539,182
_2795
DvMF_2796: DvMF_2796 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 3,539,711 to 3,541,453
_2796
DvMF_2797: DvMF_2797 - hypothetical protein (RefSeq), at 3,541,454 to 3,542,044
_2797
DvMF_2798: DvMF_2798 - transcription activator effector binding (RefSeq), at 3,542,109 to 3,542,579
_2798
Position (kb)
3539
3540
3541
3542 Strain fitness (log2 ratio)
-1
0
1 at 3538.783 kb on + strand, within DvMF_2795 at 3538.794 kb on - strand, within DvMF_2795 at 3538.828 kb on - strand, within DvMF_2795 at 3538.978 kb on - strand, within DvMF_2795 at 3539.490 kb on - strand at 3539.709 kb on + strand at 3539.717 kb on - strand at 3539.717 kb on - strand at 3539.717 kb on - strand at 3539.758 kb on - strand at 3539.931 kb on - strand, within DvMF_2796 at 3540.134 kb on + strand, within DvMF_2796 at 3540.134 kb on + strand, within DvMF_2796 at 3540.312 kb on + strand, within DvMF_2796 at 3540.343 kb on + strand, within DvMF_2796 at 3540.369 kb on - strand, within DvMF_2796 at 3540.450 kb on - strand, within DvMF_2796 at 3540.693 kb on + strand, within DvMF_2796 at 3540.923 kb on - strand, within DvMF_2796 at 3541.159 kb on - strand, within DvMF_2796 at 3541.364 kb on - strand at 3541.670 kb on - strand, within DvMF_2797 at 3541.726 kb on + strand, within DvMF_2797 at 3541.946 kb on - strand, within DvMF_2797 at 3542.006 kb on - strand at 3542.041 kb on + strand at 3542.122 kb on - strand at 3542.137 kb on - strand at 3542.244 kb on - strand, within DvMF_2798
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with D,L-Cysteine remove 3,538,783 + DvMF_2795 0.67 +0.4 3,538,794 - DvMF_2795 0.68 -0.9 3,538,828 - DvMF_2795 0.70 -1.3 3,538,978 - DvMF_2795 0.83 -0.9 3,539,490 - -1.3 3,539,709 + -1.0 3,539,717 - -0.8 3,539,717 - -0.5 3,539,717 - -0.2 3,539,758 - -0.6 3,539,931 - DvMF_2796 0.13 -0.8 3,540,134 + DvMF_2796 0.24 -0.3 3,540,134 + DvMF_2796 0.24 +0.0 3,540,312 + DvMF_2796 0.34 -0.7 3,540,343 + DvMF_2796 0.36 -0.1 3,540,369 - DvMF_2796 0.38 -0.3 3,540,450 - DvMF_2796 0.42 -0.1 3,540,693 + DvMF_2796 0.56 -0.1 3,540,923 - DvMF_2796 0.70 -0.2 3,541,159 - DvMF_2796 0.83 +0.4 3,541,364 - -0.5 3,541,670 - DvMF_2797 0.37 -0.7 3,541,726 + DvMF_2797 0.46 +0.3 3,541,946 - DvMF_2797 0.83 -0.2 3,542,006 - -0.7 3,542,041 + -0.2 3,542,122 - -0.4 3,542,137 - -0.5 3,542,244 - DvMF_2798 0.29 -0.3
Or see this region's nucleotide sequence