Experiment: MoLS4 minimal media with D,L-Cysteine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2408 and DvMF_2409 overlap by 4 nucleotides DvMF_2409 and DvMF_2410 are separated by 296 nucleotides
DvMF_2408: DvMF_2408 - major facilitator superfamily MFS_1 (RefSeq), at 3,043,276 to 3,045,846
_2408
DvMF_2409: DvMF_2409 - hypothetical protein (RefSeq), at 3,045,843 to 3,047,543
_2409
DvMF_2410: DvMF_2410 - protein serine/threonine phosphatase (RefSeq), at 3,047,840 to 3,049,822
_2410
Position (kb)
3045
3046
3047
3048 Strain fitness (log2 ratio)
-2
-1
0
1 at 3044.910 kb on - strand, within DvMF_2408 at 3044.910 kb on - strand, within DvMF_2408 at 3045.007 kb on + strand, within DvMF_2408 at 3045.227 kb on - strand, within DvMF_2408 at 3045.372 kb on - strand, within DvMF_2408 at 3045.528 kb on + strand, within DvMF_2408 at 3045.623 kb on - strand at 3045.661 kb on - strand at 3045.873 kb on - strand at 3045.888 kb on + strand at 3045.961 kb on + strand at 3045.961 kb on + strand at 3046.343 kb on + strand, within DvMF_2409 at 3046.343 kb on + strand, within DvMF_2409 at 3046.343 kb on + strand, within DvMF_2409 at 3046.346 kb on - strand, within DvMF_2409 at 3046.387 kb on + strand, within DvMF_2409 at 3046.430 kb on - strand, within DvMF_2409 at 3046.470 kb on - strand, within DvMF_2409 at 3046.594 kb on + strand, within DvMF_2409 at 3046.758 kb on - strand, within DvMF_2409 at 3046.786 kb on - strand, within DvMF_2409 at 3047.052 kb on + strand, within DvMF_2409 at 3047.578 kb on + strand at 3047.586 kb on - strand at 3048.085 kb on - strand, within DvMF_2410 at 3048.296 kb on + strand, within DvMF_2410 at 3048.296 kb on + strand, within DvMF_2410 at 3048.346 kb on + strand, within DvMF_2410 at 3048.368 kb on - strand, within DvMF_2410
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with D,L-Cysteine remove 3,044,910 - DvMF_2408 0.64 -0.7 3,044,910 - DvMF_2408 0.64 -0.4 3,045,007 + DvMF_2408 0.67 -1.4 3,045,227 - DvMF_2408 0.76 -0.6 3,045,372 - DvMF_2408 0.82 +0.2 3,045,528 + DvMF_2408 0.88 -0.3 3,045,623 - +0.4 3,045,661 - -0.9 3,045,873 - -0.7 3,045,888 + -1.4 3,045,961 + -0.8 3,045,961 + -0.3 3,046,343 + DvMF_2409 0.29 -0.2 3,046,343 + DvMF_2409 0.29 -0.0 3,046,343 + DvMF_2409 0.29 -1.1 3,046,346 - DvMF_2409 0.30 -0.4 3,046,387 + DvMF_2409 0.32 -1.5 3,046,430 - DvMF_2409 0.35 -1.1 3,046,470 - DvMF_2409 0.37 -2.2 3,046,594 + DvMF_2409 0.44 -1.0 3,046,758 - DvMF_2409 0.54 -0.6 3,046,786 - DvMF_2409 0.55 -1.5 3,047,052 + DvMF_2409 0.71 -0.8 3,047,578 + -0.6 3,047,586 - -0.4 3,048,085 - DvMF_2410 0.12 -0.9 3,048,296 + DvMF_2410 0.23 -1.5 3,048,296 + DvMF_2410 0.23 -0.3 3,048,346 + DvMF_2410 0.26 +0.1 3,048,368 - DvMF_2410 0.27 -0.9
Or see this region's nucleotide sequence