Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03354

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
3,531,160	+				+0.3
3,531,170	+				+0.2
3,531,213	+				-1.2
3,531,215	-				-0.2
3,531,239	-				-0.2
3,531,248	+				-0.9
3,531,264	-				+0.6
3,531,295	+				+0.3
3,531,295	+				-1.2
3,531,303	-				-0.1
3,531,303	-				-0.3
3,531,303	-				-0.2
3,531,344	+				-0.4
3,531,352	-				-2.5
3,531,352	-				-2.1
3,531,496	+		CCNA_03353	0.24	-1.4
3,531,500	-		CCNA_03353	0.24	-0.7
3,531,504	-		CCNA_03353	0.25	+1.3
3,531,504	-		CCNA_03353	0.25	+0.1
3,531,504	-		CCNA_03353	0.25	-0.3
3,531,504	-		CCNA_03353	0.25	+0.9
3,531,504	-		CCNA_03353	0.25	-0.5
3,531,506	+		CCNA_03353	0.25	+0.1
3,531,544	+		CCNA_03353	0.29	+0.4
3,531,547	-		CCNA_03353	0.30	+0.3
3,531,578	-		CCNA_03353	0.34	+0.2
3,531,580	+		CCNA_03353	0.34	-0.6
3,531,584	-		CCNA_03353	0.34	-0.8
3,531,624	-		CCNA_03353	0.39	-0.6
3,531,698	+		CCNA_03353	0.48	-0.3
3,531,698	+		CCNA_03353	0.48	-0.9
3,531,706	-		CCNA_03353	0.49	-0.6
3,531,706	-		CCNA_03353	0.49	-1.1
3,531,768	-		CCNA_03353	0.56	-0.7
3,531,808	-		CCNA_03353	0.61	-0.9
3,531,808	-		CCNA_03353	0.61	+1.6
3,531,840	+		CCNA_03353	0.65	+2.6
3,531,848	-		CCNA_03353	0.66	-0.9
3,531,848	-		CCNA_03353	0.66	-1.0
3,531,848	-		CCNA_03353	0.66	+0.3
3,531,848	-		CCNA_03353	0.66	+0.4
3,531,870	-		CCNA_03353	0.69	+2.2
3,531,875	-		CCNA_03353	0.69	-1.8
3,531,882	+		CCNA_03353	0.70	+0.6
3,531,884	+		CCNA_03353	0.70	-1.4
3,531,884	+		CCNA_03353	0.70	-0.9
3,531,890	-		CCNA_03353	0.71	+0.3
3,531,892	-		CCNA_03353	0.71	+0.8
3,531,892	-		CCNA_03353	0.71	-1.0
3,531,892	-		CCNA_03353	0.71	+1.0
3,531,897	-		CCNA_03353	0.72	+0.6
3,531,897	-		CCNA_03353	0.72	-1.8
3,531,914	-		CCNA_03353	0.74	-0.7
3,531,914	-		CCNA_03353	0.74	-0.7
3,531,935	-		CCNA_03353	0.76	-0.2
3,531,935	-		CCNA_03353	0.76	+2.6
3,531,947	+		CCNA_03353	0.78	-1.2
3,531,947	+		CCNA_03353	0.78	-1.6
3,531,955	+		CCNA_03353	0.79	-1.3
3,531,955	-		CCNA_03353	0.79	-2.3
3,531,955	-		CCNA_03353	0.79	-0.3
3,531,955	-		CCNA_03353	0.79	-0.2
3,531,955	-		CCNA_03353	0.79	-1.5
3,531,970	+		CCNA_03353	0.81	-0.9
3,531,978	-		CCNA_03353	0.82	-1.4
3,531,978	-		CCNA_03353	0.82	-0.5
3,531,978	-		CCNA_03353	0.82	-1.1
3,531,978	-		CCNA_03353	0.82	-2.2
3,532,017	-		CCNA_03353	0.86	+0.6
3,532,066	-				-0.0
3,532,125	+				-0.9
3,532,133	-				-0.7
3,532,150	-				+0.6
3,532,150	-				-0.0
3,532,150	-				-0.2
3,532,160	+				+1.0
3,532,173	-				+0.5
3,532,217	-				-1.6
3,532,330	+		CCNA_03354	0.27	+1.0
3,532,338	-				-1.0
3,532,338	-		CCNA_03354	0.29	-0.8
3,532,338	-		CCNA_03354	0.29	+0.1
3,532,373	+		CCNA_03354	0.34	-0.9
3,532,405	-		CCNA_03354	0.39	-0.7
3,532,405	-		CCNA_03354	0.39	-0.6
3,532,444	+		CCNA_03354	0.45	-0.9
3,532,452	-		CCNA_03354	0.46	+0.8
3,532,455	+		CCNA_03354	0.47	-0.2
3,532,504	-		CCNA_03354	0.54	-2.2
3,532,505	+		CCNA_03354	0.55	-0.8
3,532,506	+		CCNA_03354	0.55	-0.4
3,532,523	-		CCNA_03354	0.57	-1.6
3,532,523	-		CCNA_03354	0.57	+0.8
3,532,558	-				-1.6
3,532,558	-		CCNA_03354	0.63	-2.5
3,532,783	+				-0.3
3,532,810	-				+0.4
3,532,817	-				+0.0
3,532,855	-				+0.3
3,532,857	+				+0.6
3,532,865	-				+0.3
3,532,909	+				-0.1
3,532,945	-				+0.4
3,532,977	+				-0.2
3,533,000	+				+0.3
3,533,000	+				-0.7
3,533,000	+				+0.5
3,533,071	+				-0.2
3,533,080	-				+0.1
3,533,099	+				-1.0
3,533,113	-				+0.8
3,533,114	+				-2.1
3,533,122	-				+0.5
3,533,124	+				-0.2
3,533,132	-				-0.3
3,533,174	-				+0.0
3,533,174	-				-0.4
3,533,176	+				+0.5
3,533,184	-				-0.3
3,533,184	-				+0.2
3,533,184	-				+0.3
3,533,220	+				+1.6
3,533,242	-				+2.6
3,533,262	+				+1.0
3,533,272	+				-0.7
3,533,272	+				+0.0
3,533,280	-				-0.3
3,533,280	-				-0.1
3,533,285	-				-2.8
3,533,290	-				-0.1
3,533,302	-				-0.1
3,533,311	-				+0.2
3,533,324	-				+0.6
3,533,324	-				+0.3
3,533,324	-				+0.4
3,533,354	+		CCNA_03355	0.11	+1.0
3,533,367	-		CCNA_03355	0.12	+1.2
3,533,377	-		CCNA_03355	0.12	+0.6
3,533,377	-		CCNA_03355	0.12	+0.2
3,533,408	+		CCNA_03355	0.14	-0.9
3,533,437	-		CCNA_03355	0.15	+0.1
3,533,487	+		CCNA_03355	0.18	-0.3
3,533,487	+		CCNA_03355	0.18	-1.0
3,533,487	+		CCNA_03355	0.18	-0.8
3,533,487	+		CCNA_03355	0.18	-0.0
3,533,495	-		CCNA_03355	0.18	+0.1
3,533,495	-		CCNA_03355	0.18	+0.7
3,533,495	-		CCNA_03355	0.18	-0.2
3,533,495	-		CCNA_03355	0.18	-0.2
3,533,495	-		CCNA_03355	0.18	+1.5
3,533,495	-		CCNA_03355	0.18	+0.8
3,533,495	-		CCNA_03355	0.18	+0.2
3,533,495	-		CCNA_03355	0.18	+0.3
3,533,497	+		CCNA_03355	0.18	-0.5
3,533,497	+		CCNA_03355	0.18	-1.2
3,533,546	-		CCNA_03355	0.21	-0.4
3,533,549	+		CCNA_03355	0.21	+1.8
3,533,553	+		CCNA_03355	0.21	-1.2
3,533,556	+		CCNA_03355	0.21	-0.4
3,533,557	-		CCNA_03355	0.21	-0.5
3,533,562	+		CCNA_03355	0.22	+1.6
3,533,570	-		CCNA_03355	0.22	+0.3
3,533,656	+		CCNA_03355	0.26	-0.4
3,533,665	+		CCNA_03355	0.27	-3.0
3,533,702	+		CCNA_03355	0.29	-2.5
3,533,715	-		CCNA_03355	0.29	-0.2
3,533,717	+		CCNA_03355	0.29	-1.9
3,533,717	+		CCNA_03355	0.29	-1.8
3,533,717	+		CCNA_03355	0.29	+0.1
3,533,717	+		CCNA_03355	0.29	-0.5
3,533,725	-		CCNA_03355	0.30	-0.4