Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03036

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
3,189,350	+		CCNA_03035	0.16	-0.3
3,189,363	-		CCNA_03035	0.17	-0.2
3,189,363	-		CCNA_03035	0.17	-1.0
3,189,380	+		CCNA_03035	0.19	-1.3
3,189,380	+		CCNA_03035	0.19	-1.4
3,189,388	-		CCNA_03035	0.19	-0.8
3,189,388	-		CCNA_03035	0.19	-1.1
3,189,388	-		CCNA_03035	0.19	-1.3
3,189,534	-		CCNA_03035	0.33	+0.1
3,189,597	+		CCNA_03035	0.38	-1.4
3,189,605	-		CCNA_03035	0.39	-0.9
3,189,658	-		CCNA_03035	0.44	-0.6
3,189,677	+		CCNA_03035	0.46	-2.3
3,189,677	+		CCNA_03035	0.46	-1.7
3,189,680	-		CCNA_03035	0.46	-0.9
3,189,682	+		CCNA_03035	0.46	-0.1
3,189,685	-		CCNA_03035	0.47	-0.1
3,189,685	-		CCNA_03035	0.47	-0.8
3,189,688	+		CCNA_03035	0.47	-2.0
3,189,714	-		CCNA_03035	0.49	-0.1
3,189,715	-		CCNA_03035	0.49	-0.8
3,189,732	+		CCNA_03035	0.51	+0.3
3,189,740	-		CCNA_03035	0.52	-1.8
3,189,740	-		CCNA_03035	0.52	-0.9
3,189,781	+		CCNA_03035	0.55	+0.3
3,189,787	+		CCNA_03035	0.56	-0.6
3,189,787	+		CCNA_03035	0.56	-1.6
3,189,789	-		CCNA_03035	0.56	-0.1
3,189,795	-		CCNA_03035	0.57	-1.4
3,189,815	-		CCNA_03035	0.58	-0.1
3,189,833	-		CCNA_03035	0.60	-1.0
3,189,833	-		CCNA_03035	0.60	-1.1
3,189,833	-		CCNA_03035	0.60	-0.6
3,189,866	+		CCNA_03035	0.63	-1.9
3,189,874	-		CCNA_03035	0.64	-0.4
3,189,874	-		CCNA_03035	0.64	-0.3
3,189,874	-		CCNA_03035	0.64	-0.1
3,189,875	-		CCNA_03035	0.64	-0.4
3,189,916	+		CCNA_03035	0.68	-0.8
3,189,933	-		CCNA_03035	0.69	+0.3
3,189,945	+		CCNA_03035	0.70	-1.2
3,190,008	-		CCNA_03035	0.76	+0.7
3,190,013	-		CCNA_03035	0.77	-1.4
3,190,043	+		CCNA_03035	0.79	-2.9
3,190,072	+		CCNA_03035	0.82	-0.5
3,190,085	-		CCNA_03035	0.83	-0.9
3,190,132	-		CCNA_03035	0.88	-0.4
3,190,146	-		CCNA_03035	0.89	-0.9
3,190,152	-		CCNA_03035	0.89	-0.1
3,190,166	-				-1.4
3,190,173	-				-0.1
3,190,223	+				-2.9
3,190,240	-				-1.1
3,190,240	-				+0.1
3,190,264	-				+0.0
3,190,287	-				-1.2
3,190,327	+				-0.8
3,190,345	-				+0.2
3,190,403	-				-0.3
3,190,405	+				-1.2
3,190,405	+				-0.5
3,190,405	+				-1.3
3,190,405	+				-1.3
3,190,410	+				-0.5
3,190,413	-				+0.5
3,190,418	+				-0.5
3,190,445	+		CCNA_03036	0.10	-1.7
3,190,474	+		CCNA_03036	0.13	+0.3
3,190,479	+		CCNA_03036	0.13	+0.7
3,190,492	-		CCNA_03036	0.15	-1.3
3,190,549	+		CCNA_03036	0.21	-0.5
3,190,557	-		CCNA_03036	0.21	-1.0
3,190,557	-		CCNA_03036	0.21	-1.1
3,190,592	-		CCNA_03036	0.25	-0.4
3,190,599	-		CCNA_03036	0.26	-0.5
3,190,602	+		CCNA_03036	0.26	+0.7
3,190,602	+		CCNA_03036	0.26	-1.4
3,190,660	+		CCNA_03036	0.32	+0.3
3,190,670	+		CCNA_03036	0.33	-1.2
3,190,687	+		CCNA_03036	0.35	-0.8
3,190,785	-		CCNA_03036	0.45	-0.4
3,190,785	-		CCNA_03036	0.45	-1.4
3,190,806	+		CCNA_03036	0.47	-0.8
3,190,806	+		CCNA_03036	0.47	-0.3
3,190,814	-		CCNA_03036	0.48	-1.3
3,190,814	-		CCNA_03036	0.48	-2.1
3,190,814	-		CCNA_03036	0.48	-1.0
3,190,886	-		CCNA_03036	0.55	-0.6
3,190,891	+		CCNA_03036	0.56	-0.3
3,190,905	+		CCNA_03036	0.57	+0.7
3,190,905	+		CCNA_03036	0.57	-2.7
3,190,905	+		CCNA_03036	0.57	-2.3
3,190,905	+		CCNA_03036	0.57	-2.1
3,190,905	+		CCNA_03036	0.57	-0.7
3,190,913	-		CCNA_03036	0.58	-1.1
3,190,963	-		CCNA_03036	0.63	-0.3
3,190,963	-		CCNA_03036	0.63	-0.9
3,191,026	+		CCNA_03036	0.69	-1.3
3,191,035	+		CCNA_03036	0.70	-2.1
3,191,043	-		CCNA_03036	0.71	-1.5
3,191,043	-		CCNA_03036	0.71	-0.4
3,191,070	-		CCNA_03036	0.74	-1.3
3,191,077	-		CCNA_03036	0.75	-0.5
3,191,090	-		CCNA_03036	0.76	-0.7
3,191,092	+		CCNA_03036	0.76	-1.1
3,191,092	+		CCNA_03036	0.76	-3.0
3,191,125	+		CCNA_03036	0.80	-0.6
3,191,125	+		CCNA_03036	0.80	-1.6
3,191,126	+		CCNA_03036	0.80	-0.6
3,191,133	-		CCNA_03036	0.80	-0.9
3,191,134	-		CCNA_03036	0.80	-0.8
3,191,184	-		CCNA_03036	0.86	+0.1
3,191,214	+		CCNA_03036	0.89	-2.2
3,191,222	-		CCNA_03036	0.89	-0.5
3,191,330	+				-0.7
3,191,333	-				-0.5
3,191,333	-				+0.5
3,191,338	-				-1.2
3,191,424	+				-0.7
3,191,430	+				-1.8
3,191,431	+				-1.7
3,191,432	-				-0.5
3,191,439	-				-0.8
3,191,480	+		CCNA_03037	0.10	-2.8
3,191,519	-		CCNA_03037	0.13	-1.5
3,191,526	+		CCNA_03037	0.13	+1.4
3,191,539	-		CCNA_03037	0.14	+2.7
3,191,602	+		CCNA_03037	0.18	-0.9
3,191,611	+		CCNA_03037	0.19	-0.7
3,191,624	+		CCNA_03037	0.20	-1.0
3,191,624	+		CCNA_03037	0.20	-1.5
3,191,624	+		CCNA_03037	0.20	-1.9
3,191,632	-		CCNA_03037	0.20	+0.2
3,191,632	-		CCNA_03037	0.20	-1.1
3,191,654	+		CCNA_03037	0.22	+0.4
3,191,678	+		CCNA_03037	0.23	+0.0
3,191,717	-		CCNA_03037	0.26	-0.4
3,191,747	+		CCNA_03037	0.28	-1.7
3,191,747	-		CCNA_03037	0.28	-0.4
3,191,754	+		CCNA_03037	0.28	-0.6
3,191,770	+		CCNA_03037	0.29	-2.8
3,191,788	-		CCNA_03037	0.31	-1.5
3,191,802	+		CCNA_03037	0.31	+0.3
3,191,810	-		CCNA_03037	0.32	-0.8
3,191,811	-		CCNA_03037	0.32	-2.1
3,191,813	+		CCNA_03037	0.32	+0.3
3,191,818	+		CCNA_03037	0.33	-1.2
3,191,846	-		CCNA_03037	0.34	-1.1
3,191,846	-		CCNA_03037	0.34	-1.1
3,191,853	-		CCNA_03037	0.35	-0.6
3,191,956	+		CCNA_03037	0.42	+0.7
3,191,956	+		CCNA_03037	0.42	-0.7
3,191,964	-		CCNA_03037	0.42	-0.7
3,191,964	-		CCNA_03037	0.42	+0.3
3,191,979	-		CCNA_03037	0.43	+0.1
3,191,984	-		CCNA_03037	0.44	-0.2
3,191,989	-		CCNA_03037	0.44	-0.8
3,192,008	-		CCNA_03037	0.45	-0.6
3,192,035	-		CCNA_03037	0.47	-0.9
3,192,047	+		CCNA_03037	0.48	+0.4
3,192,052	+		CCNA_03037	0.48	+0.1
3,192,055	-		CCNA_03037	0.48	-1.5
3,192,065	-		CCNA_03037	0.49	-0.2
3,192,091	+		CCNA_03037	0.51	+0.0
3,192,116	-		CCNA_03037	0.52	-0.8
3,192,122	+		CCNA_03037	0.53	-0.4
3,192,127	+		CCNA_03037	0.53	-0.8
3,192,130	-		CCNA_03037	0.53	+0.8
3,192,132	+		CCNA_03037	0.53	-1.6
3,192,135	-		CCNA_03037	0.54	-1.0
3,192,171	+		CCNA_03037	0.56	-1.4
3,192,212	-		CCNA_03037	0.59	-0.1
3,192,238	-		CCNA_03037	0.60	-0.3
3,192,294	-		CCNA_03037	0.64	-0.2
3,192,318	-		CCNA_03037	0.66	+0.1