Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02479

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
2,622,916	-				+0.1
2,622,973	-				+0.2
2,622,975	-				+0.3
2,622,985	-				-0.9
2,623,030	-				+0.4
2,623,065	+				+0.9
2,623,082	+		CCNA_02478	0.11	-2.2
2,623,096	-		CCNA_02478	0.13	-0.2
2,623,126	-		CCNA_02478	0.16	-1.7
2,623,156	-		CCNA_02478	0.19	+2.7
2,623,171	+		CCNA_02478	0.21	-1.3
2,623,184	-		CCNA_02478	0.22	-0.1
2,623,193	+		CCNA_02478	0.23	-1.4
2,623,195	+		CCNA_02478	0.24	-1.7
2,623,203	-		CCNA_02478	0.24	-1.2
2,623,203	-		CCNA_02478	0.24	-0.3
2,623,210	+		CCNA_02478	0.25	-0.2
2,623,261	-		CCNA_02478	0.31	-0.9
2,623,276	+		CCNA_02478	0.33	+0.1
2,623,276	+		CCNA_02478	0.33	+0.2
2,623,276	+		CCNA_02478	0.33	-0.9
2,623,276	+		CCNA_02478	0.33	-1.0
2,623,276	+		CCNA_02478	0.33	-1.9
2,623,276	+		CCNA_02478	0.33	-0.5
2,623,284	-		CCNA_02478	0.33	+0.1
2,623,284	-		CCNA_02478	0.33	-0.1
2,623,294	-		CCNA_02478	0.35	-1.9
2,623,306	+		CCNA_02478	0.36	-2.6
2,623,348	+		CCNA_02478	0.41	+3.3
2,623,357	-		CCNA_02478	0.42	-1.4
2,623,359	+		CCNA_02478	0.42	+2.0
2,623,379	+		CCNA_02478	0.44	+0.7
2,623,452	+		CCNA_02478	0.52	+0.7
2,623,460	-		CCNA_02478	0.53	-0.5
2,623,467	+		CCNA_02478	0.54	+0.0
2,623,477	+		CCNA_02478	0.55	+0.1
2,623,483	+		CCNA_02478	0.55	-0.7
2,623,485	-		CCNA_02478	0.56	-0.8
2,623,491	-		CCNA_02478	0.56	+0.6
2,623,501	+		CCNA_02478	0.57	-1.3
2,623,535	-		CCNA_02478	0.61	-1.7
2,623,568	-		CCNA_02478	0.65	-0.2
2,623,585	+		CCNA_02478	0.67	-2.0
2,623,616	-		CCNA_02478	0.70	-0.2
2,623,644	-		CCNA_02478	0.73	-1.3
2,623,683	+		CCNA_02478	0.78	-1.4
2,623,718	+		CCNA_02478	0.82	-1.0
2,623,718	+		CCNA_02478	0.82	+1.4
2,623,734	-		CCNA_02478	0.83	+0.7
2,623,742	+		CCNA_02478	0.84	-0.4
2,623,768	+		CCNA_02478	0.87	+0.3
2,623,773	+		CCNA_02478	0.88	-1.2
2,623,811	-				-1.0
2,623,831	+				+0.5
2,623,837	-				+0.6
2,623,842	+				-0.1
2,623,861	+				-2.4
2,623,861	+				+0.1
2,623,869	-				-0.4
2,623,881	-				-0.2
2,623,881	-				+0.4
2,623,881	-				+1.7
2,623,932	-				-0.9
2,623,932	-				-1.8
2,623,981	+				-0.6
2,623,986	+				+1.7
2,623,994	-				-0.1
2,623,999	-				-0.2
2,624,044	+		CCNA_02479	0.12	-0.3
2,624,052	-		CCNA_02479	0.13	-0.6
2,624,052	-		CCNA_02479	0.13	-0.8
2,624,077	-		CCNA_02479	0.15	-1.4
2,624,145	-		CCNA_02479	0.21	-0.2
2,624,148	+		CCNA_02479	0.22	-2.0
2,624,165	-		CCNA_02479	0.23	-1.6
2,624,165	-		CCNA_02479	0.23	-0.8
2,624,168	+		CCNA_02479	0.23	-2.3
2,624,215	-		CCNA_02479	0.28	-0.6
2,624,238	+		CCNA_02479	0.30	-1.4
2,624,246	-		CCNA_02479	0.31	-0.7
2,624,246	-		CCNA_02479	0.31	-0.2
2,624,246	-		CCNA_02479	0.31	-0.9
2,624,246	-		CCNA_02479	0.31	-0.2
2,624,276	-		CCNA_02479	0.33	-1.0
2,624,303	+		CCNA_02479	0.36	-0.2
2,624,303	+		CCNA_02479	0.36	+0.1
2,624,303	+		CCNA_02479	0.36	+0.4
2,624,311	-		CCNA_02479	0.36	+0.1
2,624,318	-		CCNA_02479	0.37	-2.7
2,624,326	+		CCNA_02479	0.38	-0.5
2,624,361	-		CCNA_02479	0.41	-2.0
2,624,380	-				+2.7
2,624,385	-		CCNA_02479	0.43	-0.1
2,624,385	-		CCNA_02479	0.43	-2.4
2,624,399	-		CCNA_02479	0.44	+0.4
2,624,417	-		CCNA_02479	0.46	+0.8
2,624,464	+		CCNA_02479	0.50	-0.3
2,624,464	+		CCNA_02479	0.50	-1.1
2,624,464	+		CCNA_02479	0.50	+0.1
2,624,472	-		CCNA_02479	0.51	-0.4
2,624,518	-		CCNA_02479	0.55	-1.6
2,624,526	-		CCNA_02479	0.56	-0.7
2,624,541	+		CCNA_02479	0.57	-0.3
2,624,549	-		CCNA_02479	0.58	-1.5
2,624,566	+		CCNA_02479	0.60	+0.4
2,624,578	+		CCNA_02479	0.61	+0.6
2,624,592	+		CCNA_02479	0.62	-1.8
2,624,626	+		CCNA_02479	0.65	-0.9
2,624,626	+		CCNA_02479	0.65	-0.3
2,624,629	-		CCNA_02479	0.65	+0.4
2,624,634	-		CCNA_02479	0.66	-1.0
2,624,678	-		CCNA_02479	0.70	-1.0
2,624,686	-		CCNA_02479	0.70	-1.2
2,624,726	+		CCNA_02479	0.74	+0.0
2,624,754	-		CCNA_02479	0.77	-1.6
2,624,791	+		CCNA_02479	0.80	-0.6
2,624,799	-		CCNA_02479	0.81	-1.5
2,624,799	-		CCNA_02479	0.81	+0.1
2,624,831	+		CCNA_02479	0.84	+0.4
2,624,839	-		CCNA_02479	0.84	+0.2
2,624,868	-		CCNA_02479	0.87	-0.4
2,624,878	+		CCNA_02479	0.88	-1.5
2,624,894	-		CCNA_02479	0.89	-0.2
2,624,904	-				-1.8
2,624,964	-				+0.4
2,624,964	-				-1.0
2,625,012	+				-0.5
2,625,030	+				+0.4
2,625,030	-				-0.5
2,625,056	-				-0.0
2,625,119	+				-0.8
2,625,214	+		CCNA_02480	0.13	-0.6
2,625,260	+		CCNA_02480	0.16	-0.6
2,625,260	+		CCNA_02480	0.16	-0.7
2,625,260	+		CCNA_02480	0.16	-0.0
2,625,261	+		CCNA_02480	0.16	-1.3
2,625,268	-		CCNA_02480	0.17	-0.6
2,625,291	+		CCNA_02480	0.18	-0.5
2,625,291	+		CCNA_02480	0.18	-0.5
2,625,299	-		CCNA_02480	0.19	-1.0
2,625,299	-		CCNA_02480	0.19	+0.2
2,625,330	+		CCNA_02480	0.21	-0.4
2,625,388	-		CCNA_02480	0.25	-0.1
2,625,391	+		CCNA_02480	0.25	-1.1
2,625,391	+		CCNA_02480	0.25	+0.4
2,625,391	+		CCNA_02480	0.25	-0.9
2,625,399	-		CCNA_02480	0.26	+0.7
2,625,401	-				+2.7
2,625,403	+		CCNA_02480	0.26	+0.1
2,625,406	-		CCNA_02480	0.26	+0.2
2,625,406	-		CCNA_02480	0.26	-1.6
2,625,431	-		CCNA_02480	0.28	+0.7
2,625,440	+		CCNA_02480	0.28	+0.9
2,625,476	+		CCNA_02480	0.31	-1.2
2,625,476	+		CCNA_02480	0.31	-1.3
2,625,476	+		CCNA_02480	0.31	+0.2
2,625,476	+		CCNA_02480	0.31	-0.1
2,625,511	-		CCNA_02480	0.33	+1.1
2,625,611	+		CCNA_02480	0.40	-0.9
2,625,691	+		CCNA_02480	0.46	-0.1
2,625,722	-		CCNA_02480	0.48	+0.0
2,625,738	+		CCNA_02480	0.49	+0.6
2,625,738	+		CCNA_02480	0.49	+0.9
2,625,740	+		CCNA_02480	0.49	-1.5
2,625,745	+		CCNA_02480	0.49	-0.8
2,625,746	-		CCNA_02480	0.49	-0.9
2,625,746	-		CCNA_02480	0.49	+0.3
2,625,746	-		CCNA_02480	0.49	-0.2
2,625,771	-		CCNA_02480	0.51	-0.0
2,625,813	+		CCNA_02480	0.54	-1.4
2,625,827	+		CCNA_02480	0.55	-1.7
2,625,948	+		CCNA_02480	0.63	-0.7
2,625,948	+		CCNA_02480	0.63	-0.4
2,625,948	+		CCNA_02480	0.63	+0.8
2,625,956	-		CCNA_02480	0.64	+2.7
2,625,956	-		CCNA_02480	0.64	-1.0
2,625,966	-		CCNA_02480	0.64	-1.4
2,626,002	+		CCNA_02480	0.67	-0.6
2,626,002	+		CCNA_02480	0.67	+0.6
2,626,002	+		CCNA_02480	0.67	+0.1