Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19560
Experiment: Dilute LB (1/10)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dilute LB (1/10) |
---|---|---|---|---|---|
remove | |||||
4,088,833 | + | BWI76_RS19555 | 0.64 | +0.5 | |
4,089,122 | + | BWI76_RS19555 | 0.80 | -1.2 | |
4,089,130 | + | BWI76_RS19555 | 0.80 | +0.4 | |
4,089,167 | - | BWI76_RS19555 | 0.82 | +0.2 | |
4,089,430 | + | -0.4 | |||
4,089,438 | - | -0.1 | |||
4,089,470 | + | +0.7 | |||
4,089,479 | - | -0.0 | |||
4,089,545 | - | +0.8 | |||
4,089,782 | + | BWI76_RS19560 | 0.14 | +0.5 | |
4,089,866 | - | BWI76_RS19560 | 0.24 | +1.2 | |
4,089,985 | - | BWI76_RS19560 | 0.38 | +0.8 | |
4,090,013 | - | BWI76_RS19560 | 0.41 | +0.5 | |
4,090,071 | - | BWI76_RS19560 | 0.48 | +0.6 | |
4,090,120 | + | BWI76_RS19560 | 0.54 | +1.7 | |
4,090,156 | - | BWI76_RS19560 | 0.59 | -0.5 | |
4,090,224 | - | BWI76_RS19560 | 0.67 | +0.1 | |
4,090,303 | + | BWI76_RS19560 | 0.76 | +0.2 | |
4,090,432 | - | -1.2 | |||
4,090,436 | - | -0.8 | |||
4,090,596 | - | -0.2 | |||
4,090,715 | + | -0.1 | |||
4,090,723 | - | -0.9 | |||
4,090,723 | - | -0.2 | |||
4,090,733 | + | +0.3 | |||
4,090,856 | - | BWI76_RS19565 | 0.22 | +0.8 | |
4,090,858 | + | BWI76_RS19565 | 0.22 | -0.3 | |
4,090,906 | + | BWI76_RS19565 | 0.27 | -0.2 | |
4,091,197 | + | BWI76_RS19565 | 0.58 | -0.0 | |
4,091,311 | - | BWI76_RS19565 | 0.70 | +0.0 | |
4,091,436 | + | BWI76_RS19565 | 0.83 | +0.4 | |
4,091,444 | - | BWI76_RS19565 | 0.84 | -0.7 |
Or see this region's nucleotide sequence