Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10945

Experiment: Dilute LB (1/10)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10935 and BWI76_RS10940 are separated by 66 nucleotidesBWI76_RS10940 and BWI76_RS10945 are separated by 0 nucleotidesBWI76_RS10945 and BWI76_RS10950 are separated by 79 nucleotides BWI76_RS10935: BWI76_RS10935 - glucan biosynthesis glucosyltransferase H, at 2,309,147 to 2,311,675 _RS10935 BWI76_RS10940: BWI76_RS10940 - YceK/YidQ family lipoprotein, at 2,311,742 to 2,311,969 _RS10940 BWI76_RS10945: BWI76_RS10945 - SecY/SecA suppressor protein, at 2,311,970 to 2,312,356 _RS10945 BWI76_RS10950: BWI76_RS10950 - MFS transporter, at 2,312,436 to 2,313,686 _RS10950 Position (kb) 2311 2312 2313Strain fitness (log2 ratio) -1 0 1at 2311.155 kb on - strand, within BWI76_RS10935at 2312.304 kb on - strand, within BWI76_RS10945at 2312.539 kb on - strandat 2313.263 kb on + strand, within BWI76_RS10950at 2313.339 kb on + strand, within BWI76_RS10950at 2313.356 kb on + strand, within BWI76_RS10950

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Per-strain Table

Position Strand Gene LocusTag Fraction Dilute LB (1/10)
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2,311,155 - BWI76_RS10935 0.79 +0.1
2,312,304 - BWI76_RS10945 0.86 -0.8
2,312,539 - -0.2
2,313,263 + BWI76_RS10950 0.66 -0.0
2,313,339 + BWI76_RS10950 0.72 +0.0
2,313,356 + BWI76_RS10950 0.74 -0.9

Or see this region's nucleotide sequence