Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05210

Experiment: Dilute LB (1/10)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS05205 and BWI76_RS05210 are separated by 323 nucleotidesBWI76_RS05210 and BWI76_RS05215 are separated by 119 nucleotides BWI76_RS05205: BWI76_RS05205 - type I methionyl aminopeptidase, at 1,096,583 to 1,097,377 _RS05205 BWI76_RS05210: BWI76_RS05210 - 30S ribosomal protein S2, at 1,097,701 to 1,098,426 _RS05210 BWI76_RS05215: BWI76_RS05215 - elongation factor Ts, at 1,098,546 to 1,099,397 _RS05215 Position (kb) 1097 1098 1099Strain fitness (log2 ratio) -1 0 1at 1096.786 kb on - strand, within BWI76_RS05205at 1096.826 kb on - strand, within BWI76_RS05205at 1096.826 kb on - strand, within BWI76_RS05205at 1096.840 kb on - strand, within BWI76_RS05205at 1096.988 kb on - strand, within BWI76_RS05205at 1097.052 kb on - strand, within BWI76_RS05205at 1097.488 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Dilute LB (1/10)
remove
1,096,786 - BWI76_RS05205 0.26 +0.4
1,096,826 - BWI76_RS05205 0.31 +0.3
1,096,826 - BWI76_RS05205 0.31 -0.2
1,096,840 - BWI76_RS05205 0.32 +0.2
1,096,988 - BWI76_RS05205 0.51 -0.3
1,097,052 - BWI76_RS05205 0.59 +0.8
1,097,488 + -0.0

Or see this region's nucleotide sequence