Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0052 and DVUA0053 are separated by 250 nucleotides DVUA0053 and DVUA0054 overlap by 4 nucleotides
DVUA0052: DVUA0052 - conserved hypothetical protein (TIGR), at 64,069 to 64,737
DVUA0052
DVUA0053: DVUA0053 - conserved hypothetical protein (TIGR), at 64,988 to 65,575
DVUA0053
DVUA0054: DVUA0054 - glycosyl transferase, group 1 family protein (TIGR), at 65,572 to 66,972
DVUA0054
Position (kb) 64
65
66 Strain fitness (log2 ratio) -1
0
1
2 at 64.031 kb on - strand at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.216 kb on - strand, within DVUA0052 at 64.216 kb on - strand, within DVUA0052 at 64.236 kb on + strand, within DVUA0052 at 64.236 kb on + strand, within DVUA0052 at 64.282 kb on + strand, within DVUA0052 at 64.333 kb on + strand, within DVUA0052 at 64.361 kb on - strand, within DVUA0052 at 64.364 kb on - strand, within DVUA0052 at 64.413 kb on + strand, within DVUA0052 at 64.445 kb on + strand, within DVUA0052 at 64.445 kb on + strand, within DVUA0052 at 64.458 kb on - strand, within DVUA0052 at 64.518 kb on + strand, within DVUA0052 at 64.650 kb on + strand, within DVUA0052 at 64.701 kb on + strand at 64.701 kb on + strand at 64.709 kb on - strand at 64.714 kb on + strand at 64.717 kb on - strand at 64.724 kb on + strand at 64.732 kb on + strand at 64.732 kb on + strand at 64.740 kb on - strand at 64.768 kb on - strand at 64.779 kb on - strand at 64.779 kb on - strand at 64.781 kb on + strand at 64.835 kb on + strand at 65.030 kb on + strand at 65.035 kb on + strand at 65.038 kb on - strand at 65.043 kb on - strand at 65.121 kb on + strand, within DVUA0053 at 65.138 kb on + strand, within DVUA0053 at 65.153 kb on + strand, within DVUA0053 at 65.161 kb on - strand, within DVUA0053 at 65.259 kb on - strand, within DVUA0053 at 65.264 kb on - strand, within DVUA0053 at 65.327 kb on + strand, within DVUA0053 at 65.444 kb on + strand, within DVUA0053 at 65.452 kb on - strand, within DVUA0053 at 65.516 kb on + strand, within DVUA0053 at 65.597 kb on + strand at 65.605 kb on - strand at 65.611 kb on - strand at 65.637 kb on + strand at 65.649 kb on - strand at 65.895 kb on + strand, within DVUA0054 at 65.903 kb on - strand, within DVUA0054 at 65.903 kb on - strand, within DVUA0054 at 65.903 kb on - strand, within DVUA0054 at 65.921 kb on + strand, within DVUA0054 at 65.929 kb on - strand, within DVUA0054 at 65.980 kb on + strand, within DVUA0054 at 66.012 kb on + strand, within DVUA0054 at 66.045 kb on - strand, within DVUA0054 at 66.055 kb on - strand, within DVUA0054 at 66.147 kb on - strand, within DVUA0054 at 66.149 kb on + strand, within DVUA0054 at 66.221 kb on + strand, within DVUA0054 at 66.292 kb on + strand, within DVUA0054 at 66.344 kb on - strand, within DVUA0054 at 66.401 kb on - strand, within DVUA0054 at 66.413 kb on + strand, within DVUA0054 at 66.464 kb on - strand, within DVUA0054 at 66.479 kb on - strand, within DVUA0054 at 66.487 kb on - strand, within DVUA0054 at 66.507 kb on + strand, within DVUA0054 at 66.521 kb on + strand, within DVUA0054 at 66.543 kb on + strand, within DVUA0054 at 66.574 kb on - strand, within DVUA0054
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 64,031 - +0.1 64,208 + DVUA0052 0.21 -0.2 64,208 + DVUA0052 0.21 -0.6 64,208 + DVUA0052 0.21 +0.3 64,208 + DVUA0052 0.21 -0.5 64,216 - DVUA0052 0.22 -0.2 64,216 - DVUA0052 0.22 -0.1 64,236 + DVUA0052 0.25 -0.1 64,236 + DVUA0052 0.25 +0.1 64,282 + DVUA0052 0.32 +0.1 64,333 + DVUA0052 0.39 -0.5 64,361 - DVUA0052 0.44 +0.4 64,364 - DVUA0052 0.44 -0.2 64,413 + DVUA0052 0.51 -0.5 64,445 + DVUA0052 0.56 +0.3 64,445 + DVUA0052 0.56 -0.4 64,458 - DVUA0052 0.58 +0.4 64,518 + DVUA0052 0.67 -0.1 64,650 + DVUA0052 0.87 +0.1 64,701 + -0.1 64,701 + -0.4 64,709 - -0.4 64,714 + -0.2 64,717 - -0.2 64,724 + -0.2 64,732 + +0.2 64,732 + -0.2 64,740 - -0.2 64,768 - +0.6 64,779 - -0.8 64,779 - +0.0 64,781 + -0.2 64,835 + -0.1 65,030 + +0.0 65,035 + -0.1 65,038 - -0.1 65,043 - +0.5 65,121 + DVUA0053 0.23 +0.1 65,138 + DVUA0053 0.26 +0.1 65,153 + DVUA0053 0.28 +0.2 65,161 - DVUA0053 0.29 -0.2 65,259 - DVUA0053 0.46 +0.5 65,264 - DVUA0053 0.47 -0.1 65,327 + DVUA0053 0.58 -0.8 65,444 + DVUA0053 0.78 +0.0 65,452 - DVUA0053 0.79 +1.9 65,516 + DVUA0053 0.90 +0.1 65,597 + -0.4 65,605 - -0.4 65,611 - -0.3 65,637 + +0.2 65,649 - -0.2 65,895 + DVUA0054 0.23 +0.5 65,903 - DVUA0054 0.24 -0.3 65,903 - DVUA0054 0.24 +0.5 65,903 - DVUA0054 0.24 +0.7 65,921 + DVUA0054 0.25 -0.2 65,929 - DVUA0054 0.25 -0.5 65,980 + DVUA0054 0.29 +0.4 66,012 + DVUA0054 0.31 -0.1 66,045 - DVUA0054 0.34 -0.9 66,055 - DVUA0054 0.34 -1.5 66,147 - DVUA0054 0.41 -0.1 66,149 + DVUA0054 0.41 -0.8 66,221 + DVUA0054 0.46 +0.6 66,292 + DVUA0054 0.51 +0.0 66,344 - DVUA0054 0.55 -1.2 66,401 - DVUA0054 0.59 -0.7 66,413 + DVUA0054 0.60 -0.2 66,464 - DVUA0054 0.64 +0.0 66,479 - DVUA0054 0.65 +0.1 66,487 - DVUA0054 0.65 -1.1 66,507 + DVUA0054 0.67 +0.0 66,521 + DVUA0054 0.68 +0.3 66,543 + DVUA0054 0.69 -0.3 66,574 - DVUA0054 0.72 -1.7
Or see this region's nucleotide sequence