Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1507 and DVU1508 overlap by 1 nucleotides DVU1508 and DVU1509 are separated by 163 nucleotides DVU1509 and DVU1510 overlap by 8 nucleotides DVU1510 and DVU1511 are separated by 108 nucleotides DVU1511 and DVU1513 are separated by 249 nucleotides
DVU1507: DVU1507 - hypothetical protein (TIGR), at 1,581,129 to 1,581,479
DVU1507
DVU1508: DVU1508 - conserved hypothetical protein (TIGR), at 1,581,479 to 1,581,886
DVU1508
DVU1509: DVU1509 - conserved hypothetical protein (TIGR), at 1,582,050 to 1,582,439
DVU1509
DVU1510: DVU1510 - hypothetical protein (TIGR), at 1,582,432 to 1,582,995
DVU1510
DVU1511: DVU1511 - hypothetical protein (TIGR), at 1,583,104 to 1,583,334
DVU1511
DVU1513: DVU1513 - conserved hypothetical protein (TIGR), at 1,583,584 to 1,584,078
DVU1513
Position (kb)
1582
1583 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1581.992 kb on - strand at 1582.019 kb on - strand at 1582.023 kb on + strand at 1582.033 kb on + strand at 1582.429 kb on + strand at 1582.898 kb on + strand, within DVU1510 at 1583.091 kb on + strand at 1583.195 kb on + strand, within DVU1511 at 1583.281 kb on - strand, within DVU1511 at 1583.293 kb on + strand, within DVU1511 at 1583.434 kb on + strand at 1583.442 kb on - strand at 1583.498 kb on + strand at 1583.513 kb on + strand at 1583.558 kb on + strand at 1583.582 kb on + strand at 1583.582 kb on + strand at 1583.590 kb on - strand at 1583.590 kb on - strand at 1583.702 kb on + strand, within DVU1513 at 1583.703 kb on + strand, within DVU1513 at 1583.710 kb on - strand, within DVU1513 at 1583.837 kb on - strand, within DVU1513 at 1583.898 kb on + strand, within DVU1513 at 1583.906 kb on - strand, within DVU1513 at 1583.947 kb on - strand, within DVU1513
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 1,581,992 - -0.2 1,582,019 - -0.1 1,582,023 + -3.0 1,582,033 + -1.8 1,582,429 + -3.5 1,582,898 + DVU1510 0.83 -1.0 1,583,091 + -3.7 1,583,195 + DVU1511 0.39 -0.3 1,583,281 - DVU1511 0.77 -0.0 1,583,293 + DVU1511 0.82 -0.2 1,583,434 + -1.6 1,583,442 - +0.2 1,583,498 + -1.4 1,583,513 + -0.0 1,583,558 + -0.9 1,583,582 + +0.5 1,583,582 + -0.3 1,583,590 - -0.0 1,583,590 - +0.0 1,583,702 + DVU1513 0.24 -0.5 1,583,703 + DVU1513 0.24 +0.3 1,583,710 - DVU1513 0.25 -1.9 1,583,837 - DVU1513 0.51 -0.2 1,583,898 + DVU1513 0.63 -0.0 1,583,906 - DVU1513 0.65 +0.0 1,583,947 - DVU1513 0.73 -0.3
Or see this region's nucleotide sequence