Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4077

Experiment: Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM
5,316,591	-		BT4076	0.64	-1.5
5,316,629	-		BT4076	0.65	-1.1
5,316,629	-		BT4076	0.65	-0.5
5,316,640	+		BT4076	0.66	-1.4
5,316,640	+		BT4076	0.66	-1.6
5,316,726	-		BT4076	0.69	-1.6
5,316,726	-		BT4076	0.69	-1.0
5,316,759	-		BT4076	0.70	-0.6
5,316,906	+		BT4076	0.76	-2.6
5,316,910	+		BT4076	0.76	+1.5
5,316,910	+		BT4076	0.76	-0.0
5,316,911	-		BT4076	0.76	-1.0
5,316,911	-		BT4076	0.76	+0.8
5,316,911	-		BT4076	0.76	-1.4
5,316,915	+		BT4076	0.76	-1.6
5,316,934	-		BT4076	0.77	-0.9
5,317,049	+		BT4076	0.81	-1.3
5,317,050	-		BT4076	0.81	-1.0
5,317,050	-		BT4076	0.81	-1.9
5,317,103	+		BT4076	0.83	-0.2
5,317,138	+		BT4076	0.84	-1.6
5,317,145	-		BT4076	0.85	-2.0
5,317,145	-		BT4076	0.85	-0.8
5,317,146	+		BT4076	0.85	-1.5
5,317,152	-		BT4076	0.85	-0.7
5,317,152	-		BT4076	0.85	-4.7
5,317,155	+		BT4076	0.85	-0.0
5,317,156	-		BT4076	0.85	-2.0
5,317,217	-		BT4076	0.87	-0.9
5,317,218	+		BT4076	0.87	-2.4
5,317,266	-		BT4076	0.89	-2.4
5,317,295	+				-2.0
5,317,358	-				-0.5
5,317,393	-				-1.9
5,317,395	+				-1.0
5,317,396	-				-0.0
5,317,447	-				-1.0
5,317,471	-				-0.3
5,317,489	-				-1.0
5,317,518	-				-1.6
5,317,538	-				-0.6
5,317,562	+				-0.9
5,317,562	+				-2.0
5,317,580	+				-0.8
5,317,611	+				+1.0
5,317,615	-				-1.0
5,317,666	-		BT4077	0.11	-0.5
5,317,715	-		BT4077	0.17	-2.0
5,317,732	-		BT4077	0.19	-3.0
5,317,770	+		BT4077	0.23	-1.6
5,317,771	-		BT4077	0.24	-1.7
5,317,807	+		BT4077	0.28	-1.0
5,317,818	+		BT4077	0.29	-0.3
5,317,855	-		BT4077	0.33	-3.0
5,317,860	+		BT4077	0.34	-2.4
5,317,915	+		BT4077	0.40	-2.6
5,317,915	+		BT4077	0.40	+0.7
5,317,922	-		BT4077	0.41	-1.4
5,317,972	-		BT4077	0.47	-2.3
5,318,189	+		BT4077	0.72	-0.8
5,318,191	-		BT4077	0.72	-2.1
5,318,226	-		BT4077	0.76	-1.7
5,318,252	-		BT4077	0.79	+1.0
5,318,252	-		BT4077	0.79	-1.6
5,318,252	-		BT4077	0.79	-1.5
5,318,253	+		BT4077	0.79	-0.9
5,318,254	-		BT4077	0.79	-0.0
5,318,300	+		BT4077	0.85	-1.1
5,318,304	+		BT4077	0.85	-0.0
5,318,304	+		BT4077	0.85	-1.6
5,318,305	-		BT4077	0.85	-2.6
5,318,316	-		BT4077	0.86	-1.8
5,318,462	-				-1.6
5,318,664	+				-1.6
5,318,696	+				-0.2
5,318,706	+				-0.0
5,318,706	+				-0.4
5,318,771	-				-1.6
5,318,809	-				-0.6
5,318,831	-				-1.6
5,318,832	+				-0.0
5,318,868	+		BT4078	0.15	-0.0
5,318,929	+		BT4078	0.24	-1.6
5,318,930	-		BT4078	0.24	-0.0
5,318,977	+		BT4078	0.31	-0.5
5,318,977	+		BT4078	0.31	+1.3
5,319,005	+		BT4078	0.35	-2.6
5,319,006	-		BT4078	0.35	-2.1
5,319,007	+		BT4078	0.35	-1.3
5,319,014	-		BT4078	0.36	-1.4
5,319,025	+		BT4078	0.38	-1.1
5,319,026	-		BT4078	0.38	-1.6
5,319,107	-		BT4078	0.49	-1.9
5,319,129	+		BT4078	0.53	-0.8
5,319,135	-		BT4078	0.53	-0.0
5,319,137	-		BT4078	0.54	-0.4
5,319,184	-		BT4078	0.60	-1.9
5,319,235	-		BT4078	0.68	-0.7
5,319,252	-		BT4078	0.70	-0.0
5,319,305	+		BT4078	0.78	-2.0
5,319,306	-		BT4078	0.78	-1.0
5,319,342	-		BT4078	0.83	+1.0
5,319,357	+		BT4078	0.85	-3.2
5,319,385	-		BT4078	0.89	-0.9
5,319,398	-				-0.0
5,319,398	-				-2.4
5,319,398	-				-1.4
5,319,400	-				-0.0
5,319,400	-				-1.9
5,319,403	+				-0.8
5,319,404	-				-0.9