Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1848

Experiment: Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM
2,319,302	+				-1.2
2,319,389	-				-1.8
2,319,429	-				-1.8
2,320,019	-				+1.6
2,320,172	-				-2.8
2,320,221	+				-0.4
2,320,302	-				-2.5
2,320,350	-				-0.6
2,320,372	-				-0.8
2,320,384	+		BT1848	0.10	-0.0
2,320,421	+		BT1848	0.12	-2.3
2,320,422	-		BT1848	0.12	-2.3
2,320,460	+		BT1848	0.14	-2.0
2,320,609	+		BT1848	0.22	-1.3
2,320,623	+		BT1848	0.23	+1.0
2,320,698	+		BT1848	0.27	+1.6
2,320,788	-		BT1848	0.32	-1.6
2,320,950	+		BT1848	0.41	-1.6
2,321,017	+		BT1848	0.44	-1.7
2,321,090	+		BT1848	0.48	-1.0
2,321,154	+		BT1848	0.51	-2.2
2,321,155	-		BT1848	0.52	-3.3
2,321,163	+		BT1848	0.52	-1.8
2,321,217	-		BT1848	0.55	-2.0
2,321,227	-		BT1848	0.55	-2.9
2,321,231	+		BT1848	0.56	-1.0
2,321,232	-		BT1848	0.56	-3.1
2,321,502	-		BT1848	0.70	-2.7
2,321,506	-		BT1848	0.70	-2.5
2,321,506	-		BT1848	0.70	-0.0
2,321,514	-		BT1848	0.71	-0.4
2,321,516	+		BT1848	0.71	-0.0
2,321,517	-		BT1848	0.71	+1.0
2,321,576	+		BT1848	0.74	-1.8
2,321,576	+		BT1848	0.74	-0.0
2,321,603	+		BT1848	0.76	-2.2
2,321,648	+		BT1848	0.78	-1.4
2,321,664	-		BT1848	0.79	-2.0
2,321,668	+		BT1848	0.79	-2.3
2,321,911	-				-0.0
2,321,962	-				-2.6
2,322,055	+				-1.3
2,322,064	-				-0.0
2,322,100	+		BT1849	0.26	-0.0
2,322,131	+		BT1849	0.42	-1.1
2,322,136	+		BT1849	0.45	-1.8
2,322,208	-				-1.6
2,322,208	-				-1.4
2,322,244	+				-1.1
2,322,245	-				-0.0
2,322,260	-				-1.6
2,322,278	-				-2.6
2,322,278	-				-0.7
2,322,289	+				+0.6
2,322,363	-		BT1850	0.14	-1.2
2,322,364	+		BT1850	0.15	-1.4
2,322,365	-		BT1850	0.15	-1.6
2,322,370	+		BT1850	0.15	+1.4
2,322,371	-		BT1850	0.15	-0.0
2,322,375	+		BT1850	0.16	-2.2
2,322,375	+		BT1850	0.16	-2.5
2,322,375	+		BT1850	0.16	-2.3
2,322,379	+		BT1850	0.16	+1.6
2,322,400	+		BT1850	0.18	-0.0
2,322,401	-		BT1850	0.18	-1.5
2,322,435	-		BT1850	0.21	-0.4
2,322,437	-		BT1850	0.21	+2.0
2,322,458	-		BT1850	0.23	-3.0
2,322,458	-		BT1850	0.23	-1.6
2,322,482	-		BT1850	0.25	-0.0
2,322,504	-		BT1850	0.27	-0.6
2,322,504	-		BT1850	0.27	-1.0
2,322,521	-		BT1850	0.29	-2.0
2,322,548	+		BT1850	0.31	-1.0
2,322,548	+		BT1850	0.31	-2.0
2,322,566	-		BT1850	0.33	+1.3
2,322,602	+		BT1850	0.36	-2.0
2,322,603	-		BT1850	0.36	-1.0
2,322,638	+		BT1850	0.40	-1.8
2,322,644	+		BT1850	0.40	+0.6
2,322,645	-		BT1850	0.40	-1.0
2,322,645	-		BT1850	0.40	-1.7
2,322,645	-		BT1850	0.40	-1.6
2,322,648	+		BT1850	0.41	+2.0
2,322,648	+		BT1850	0.41	-2.0
2,322,649	-		BT1850	0.41	+0.4
2,322,687	+		BT1850	0.44	+1.3
2,322,697	+		BT1850	0.45	-1.6
2,322,697	+		BT1850	0.45	-2.0
2,322,698	-		BT1850	0.45	-1.6
2,322,698	-		BT1850	0.45	-0.0
2,322,702	+		BT1850	0.46	-2.6
2,322,754	-		BT1850	0.50	-1.5
2,322,771	-		BT1850	0.52	+0.3
2,322,833	+		BT1850	0.58	+2.3
2,322,835	+		BT1850	0.58	-2.3
2,322,835	+		BT1850	0.58	+0.3
2,322,836	-		BT1850	0.58	-0.0
2,322,836	-		BT1850	0.58	-0.0
2,322,838	+		BT1850	0.58	-0.2
2,322,838	+		BT1850	0.58	-2.0
2,322,839	-		BT1850	0.58	-1.0
2,322,842	+		BT1850	0.58	-0.1
2,322,926	-		BT1850	0.66	-0.0
2,322,980	-		BT1850	0.71	-1.7
2,322,980	-		BT1850	0.71	-2.3
2,322,980	-		BT1850	0.71	+0.4
2,322,980	-		BT1850	0.71	-1.0
2,322,981	+		BT1850	0.71	-2.3
2,322,981	+		BT1850	0.71	-0.0
2,322,982	-		BT1850	0.71	-1.9
2,322,982	-		BT1850	0.71	-2.0
2,322,986	+		BT1850	0.72	+2.3
2,322,987	-		BT1850	0.72	-1.6
2,322,992	-		BT1850	0.72	-0.3
2,322,998	-		BT1850	0.73	-0.6
2,323,016	-		BT1850	0.74	-0.2