Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1113

Experiment: Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM
1,399,046	+				-1.0
1,399,046	+				+1.0
1,399,046	+				-1.6
1,399,047	-				-0.7
1,399,173	+				+0.0
1,399,438	+		BT1112	0.79	-2.0
1,399,443	-		BT1112	0.81	-3.4
1,399,736	-				-0.7
1,399,871	+				+0.4
1,399,881	+				-0.4
1,399,940	-				-0.8
1,399,955	+				-0.6
1,399,955	+				+2.4
1,399,961	+				-1.6
1,400,080	+		BT1113	0.18	-1.2
1,400,080	+		BT1113	0.18	-1.3
1,400,095	-		BT1113	0.22	-2.0
1,400,131	-		BT1113	0.32	-2.3
1,400,131	-		BT1113	0.32	-1.6
1,400,235	+		BT1113	0.62	-1.0
1,400,241	-		BT1113	0.64	+0.0
1,400,251	-		BT1113	0.67	-0.6
1,400,251	-		BT1113	0.67	-3.3
1,400,251	-		BT1113	0.67	+0.0
1,400,325	+		BT1113	0.88	-2.3
1,400,327	+		BT1113	0.88	-2.8
1,400,340	-				-2.0
1,400,437	+				+1.0
1,400,438	-				-1.6
1,400,522	+				-0.2
1,400,540	+				-2.0
1,400,562	-				-0.2
1,400,743	+		BT1114	0.14	-1.0
1,400,865	+		BT1114	0.26	-3.4
1,400,983	-		BT1114	0.37	-1.0
1,400,988	-		BT1114	0.38	+0.0
1,400,988	-		BT1114	0.38	-2.1
1,401,022	+		BT1114	0.41	-0.7
1,401,096	+		BT1114	0.48	+0.0
1,401,097	-		BT1114	0.48	-0.8
1,401,108	+		BT1114	0.49	-0.3
1,401,191	+		BT1114	0.57	+0.4
1,401,191	+		BT1114	0.57	-2.0
1,401,191	+		BT1114	0.57	-2.3
1,401,350	+		BT1114	0.73	-1.0