Experiment: Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0761 and BT0762 are separated by 32 nucleotides BT0762 and tRNA-Arg are separated by 135 nucleotides tRNA-Arg and BT0763 are separated by 292 nucleotides BT0763 and BT0764 are separated by 49 nucleotides
BT0761: BT0761 - conserved hypothetical protein (NCBI ptt file), at 949,431 to 951,479
BT0761
BT0762: BT0762 - hypothetical protein (NCBI ptt file), at 951,512 to 951,697
BT0762
BT_t09: tRNA-Arg - tRNA-Arg (RefSeq), at 951,833 to 951,906
tRNA-Arg
BT0763: BT0763 - conserved hypothetical protein (NCBI ptt file), at 952,199 to 953,884
BT0763
BT0764: BT0764 - hypothetical protein (NCBI ptt file), at 953,934 to 955,268
BT0764
Position (kb) 952
953
954 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 951.261 kb on - strand, within BT0761 at 951.419 kb on + strand at 951.505 kb on - strand at 951.509 kb on + strand at 951.510 kb on - strand at 951.513 kb on + strand at 951.565 kb on - strand, within BT0762 at 951.565 kb on - strand, within BT0762 at 951.651 kb on + strand, within BT0762 at 951.651 kb on + strand, within BT0762 at 951.663 kb on + strand, within BT0762 at 951.666 kb on - strand, within BT0762 at 952.057 kb on - strand at 952.093 kb on - strand at 952.100 kb on + strand at 952.264 kb on + strand at 952.372 kb on + strand, within BT0763 at 952.432 kb on + strand, within BT0763 at 952.447 kb on + strand, within BT0763 at 952.471 kb on + strand, within BT0763 at 952.512 kb on - strand, within BT0763 at 952.513 kb on + strand, within BT0763 at 952.538 kb on - strand, within BT0763 at 952.735 kb on + strand, within BT0763 at 952.757 kb on - strand, within BT0763 at 952.908 kb on - strand, within BT0763 at 952.926 kb on - strand, within BT0763 at 952.933 kb on + strand, within BT0763 at 952.985 kb on + strand, within BT0763 at 952.985 kb on + strand, within BT0763 at 952.985 kb on + strand, within BT0763 at 953.049 kb on - strand, within BT0763 at 953.085 kb on + strand, within BT0763 at 953.091 kb on - strand, within BT0763 at 953.157 kb on - strand, within BT0763 at 953.159 kb on + strand, within BT0763 at 953.162 kb on + strand, within BT0763 at 953.163 kb on - strand, within BT0763 at 953.533 kb on - strand, within BT0763 at 953.573 kb on - strand, within BT0763 at 953.608 kb on + strand, within BT0763 at 953.610 kb on + strand, within BT0763 at 953.696 kb on + strand, within BT0763 at 953.735 kb on - strand at 953.765 kb on - strand at 953.882 kb on + strand at 953.975 kb on + strand at 953.976 kb on - strand at 954.144 kb on - strand, within BT0764 at 954.268 kb on + strand, within BT0764 at 954.275 kb on + strand, within BT0764 at 954.276 kb on - strand, within BT0764 at 954.346 kb on + strand, within BT0764 at 954.348 kb on + strand, within BT0764 at 954.349 kb on - strand, within BT0764 at 954.352 kb on - strand, within BT0764 at 954.352 kb on - strand, within BT0764 at 954.383 kb on + strand, within BT0764 at 954.387 kb on + strand, within BT0764 at 954.388 kb on - strand, within BT0764 at 954.388 kb on - strand, within BT0764 at 954.408 kb on - strand, within BT0764 at 954.430 kb on - strand, within BT0764 at 954.475 kb on + strand, within BT0764 at 954.476 kb on - strand, within BT0764 at 954.509 kb on + strand, within BT0764 at 954.509 kb on + strand, within BT0764 at 954.509 kb on + strand, within BT0764 at 954.510 kb on - strand, within BT0764 at 954.829 kb on - strand, within BT0764
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM remove 951,261 - BT0761 0.89 -0.9 951,419 + +0.1 951,505 - +0.6 951,509 + +1.1 951,510 - -1.9 951,513 + +0.1 951,565 - BT0762 0.28 -0.9 951,565 - BT0762 0.28 -1.5 951,651 + BT0762 0.75 -1.5 951,651 + BT0762 0.75 +0.1 951,663 + BT0762 0.81 +1.1 951,666 - BT0762 0.83 -1.8 952,057 - +2.1 952,093 - +0.1 952,100 + +0.1 952,264 + +0.1 952,372 + BT0763 0.10 +0.1 952,432 + BT0763 0.14 -0.3 952,447 + BT0763 0.15 +0.1 952,471 + BT0763 0.16 -1.5 952,512 - BT0763 0.19 +0.1 952,513 + BT0763 0.19 +0.1 952,538 - BT0763 0.20 -2.3 952,735 + BT0763 0.32 -0.7 952,757 - BT0763 0.33 -1.5 952,908 - BT0763 0.42 +1.7 952,926 - BT0763 0.43 -0.3 952,933 + BT0763 0.44 +1.7 952,985 + BT0763 0.47 -0.7 952,985 + BT0763 0.47 -0.4 952,985 + BT0763 0.47 +1.1 953,049 - BT0763 0.50 -2.9 953,085 + BT0763 0.53 -2.5 953,091 - BT0763 0.53 -2.4 953,157 - BT0763 0.57 +1.4 953,159 + BT0763 0.57 -0.5 953,162 + BT0763 0.57 -0.9 953,163 - BT0763 0.57 -0.6 953,533 - BT0763 0.79 +0.4 953,573 - BT0763 0.81 -1.5 953,608 + BT0763 0.84 +0.1 953,610 + BT0763 0.84 -1.5 953,696 + BT0763 0.89 -0.2 953,735 - -0.8 953,765 - -1.5 953,882 + -1.5 953,975 + -1.2 953,976 - +1.1 954,144 - BT0764 0.16 -0.3 954,268 + BT0764 0.25 -1.3 954,275 + BT0764 0.26 +0.7 954,276 - BT0764 0.26 -0.4 954,346 + BT0764 0.31 -2.9 954,348 + BT0764 0.31 -1.5 954,349 - BT0764 0.31 +0.1 954,352 - BT0764 0.31 +0.1 954,352 - BT0764 0.31 -0.2 954,383 + BT0764 0.34 +0.1 954,387 + BT0764 0.34 -0.9 954,388 - BT0764 0.34 +1.1 954,388 - BT0764 0.34 -0.8 954,408 - BT0764 0.36 +1.1 954,430 - BT0764 0.37 -0.5 954,475 + BT0764 0.41 -0.9 954,476 - BT0764 0.41 +0.1 954,509 + BT0764 0.43 -2.3 954,509 + BT0764 0.43 -1.5 954,509 + BT0764 0.43 -0.2 954,510 - BT0764 0.43 +0.1 954,829 - BT0764 0.67 +0.5
Or see this region's nucleotide sequence