Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0425 and DVU0426 are separated by 207 nucleotides DVU0426 and DVU0428 are separated by 477 nucleotides
DVU0425: DVU0425 - hypothetical protein (TIGR), at 480,810 to 481,616
DVU0425
DVU0426: DVU0426 - chromate transport family protein (TIGR), at 481,824 to 483,176
DVU0426
DVU0428: DVU0428 - conserved hypothetical protein (TIGR), at 483,654 to 483,974
DVU0428
Position (kb) 481
482
483
484 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 480.950 kb on + strand, within DVU0425 at 481.036 kb on + strand, within DVU0425 at 481.084 kb on - strand, within DVU0425 at 481.118 kb on + strand, within DVU0425 at 481.126 kb on - strand, within DVU0425 at 481.161 kb on - strand, within DVU0425 at 481.173 kb on + strand, within DVU0425 at 481.187 kb on + strand, within DVU0425 at 481.207 kb on - strand, within DVU0425 at 481.226 kb on - strand, within DVU0425 at 481.240 kb on - strand, within DVU0425 at 481.344 kb on - strand, within DVU0425 at 481.365 kb on - strand, within DVU0425 at 481.417 kb on - strand, within DVU0425 at 481.421 kb on + strand, within DVU0425 at 481.469 kb on + strand, within DVU0425 at 481.496 kb on - strand, within DVU0425 at 481.525 kb on - strand, within DVU0425 at 481.611 kb on + strand at 481.611 kb on + strand at 481.619 kb on - strand at 481.619 kb on - strand at 481.688 kb on - strand at 481.723 kb on - strand at 481.723 kb on - strand at 481.736 kb on - strand at 481.768 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.822 kb on + strand at 481.830 kb on - strand at 481.830 kb on - strand at 481.834 kb on + strand at 481.886 kb on + strand at 481.946 kb on + strand at 481.986 kb on + strand, within DVU0426 at 482.073 kb on - strand, within DVU0426 at 482.084 kb on - strand, within DVU0426 at 482.095 kb on + strand, within DVU0426 at 482.097 kb on + strand, within DVU0426 at 482.105 kb on - strand, within DVU0426 at 482.284 kb on + strand, within DVU0426 at 482.465 kb on - strand, within DVU0426 at 482.473 kb on + strand, within DVU0426 at 482.478 kb on + strand, within DVU0426 at 482.486 kb on - strand, within DVU0426 at 482.509 kb on - strand, within DVU0426 at 482.560 kb on + strand, within DVU0426 at 482.569 kb on - strand, within DVU0426 at 482.592 kb on + strand, within DVU0426 at 482.600 kb on - strand, within DVU0426 at 482.601 kb on - strand, within DVU0426 at 482.674 kb on + strand, within DVU0426 at 482.722 kb on + strand, within DVU0426 at 482.730 kb on - strand, within DVU0426 at 482.730 kb on - strand, within DVU0426 at 482.743 kb on + strand, within DVU0426 at 482.749 kb on - strand, within DVU0426 at 482.768 kb on + strand, within DVU0426 at 482.846 kb on + strand, within DVU0426 at 482.934 kb on - strand, within DVU0426 at 482.970 kb on + strand, within DVU0426 at 482.978 kb on - strand, within DVU0426 at 483.002 kb on + strand, within DVU0426 at 483.029 kb on - strand, within DVU0426 at 483.039 kb on + strand, within DVU0426 at 483.039 kb on + strand, within DVU0426 at 483.140 kb on + strand at 483.149 kb on - strand at 483.220 kb on - strand at 483.226 kb on + strand at 483.234 kb on - strand at 483.403 kb on - strand at 483.403 kb on - strand at 483.487 kb on + strand at 483.560 kb on - strand at 483.565 kb on + strand at 483.565 kb on - strand at 483.587 kb on + strand at 483.619 kb on - strand at 483.637 kb on + strand at 483.644 kb on + strand at 483.759 kb on - strand, within DVU0428 at 483.780 kb on + strand, within DVU0428 at 483.846 kb on - strand, within DVU0428 at 483.892 kb on + strand, within DVU0428 at 483.977 kb on + strand at 483.977 kb on + strand at 483.985 kb on - strand at 484.052 kb on - strand at 484.087 kb on + strand at 484.100 kb on + strand at 484.108 kb on - strand at 484.111 kb on + strand at 484.169 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 480,950 + DVU0425 0.17 +0.4 481,036 + DVU0425 0.28 -0.7 481,084 - DVU0425 0.34 +2.2 481,118 + DVU0425 0.38 +1.2 481,126 - DVU0425 0.39 +1.9 481,161 - DVU0425 0.43 +0.4 481,173 + DVU0425 0.45 -1.3 481,187 + DVU0425 0.47 +1.9 481,207 - DVU0425 0.49 -0.3 481,226 - DVU0425 0.52 +0.3 481,240 - DVU0425 0.53 +0.4 481,344 - DVU0425 0.66 +0.6 481,365 - DVU0425 0.69 +0.2 481,417 - DVU0425 0.75 -0.0 481,421 + DVU0425 0.76 -0.2 481,469 + DVU0425 0.82 +0.8 481,496 - DVU0425 0.85 -0.5 481,525 - DVU0425 0.89 -3.2 481,611 + -0.6 481,611 + +0.1 481,619 - +1.5 481,619 - -0.2 481,688 - -0.4 481,723 - -0.4 481,723 - -0.6 481,736 - -0.3 481,768 + -0.5 481,822 + -1.6 481,822 + -1.7 481,822 + -0.7 481,822 + -0.3 481,822 + +1.8 481,830 - -0.7 481,830 - +0.7 481,834 + -0.1 481,886 + -1.5 481,946 + -0.9 481,986 + DVU0426 0.12 +0.8 482,073 - DVU0426 0.18 -1.1 482,084 - DVU0426 0.19 -1.2 482,095 + DVU0426 0.20 -1.2 482,097 + DVU0426 0.20 -1.5 482,105 - DVU0426 0.21 -1.3 482,284 + DVU0426 0.34 -1.8 482,465 - DVU0426 0.47 -1.2 482,473 + DVU0426 0.48 -1.4 482,478 + DVU0426 0.48 -2.0 482,486 - DVU0426 0.49 -2.0 482,509 - DVU0426 0.51 -1.7 482,560 + DVU0426 0.54 -1.7 482,569 - DVU0426 0.55 -1.6 482,592 + DVU0426 0.57 -0.5 482,600 - DVU0426 0.57 -1.1 482,601 - DVU0426 0.57 -1.6 482,674 + DVU0426 0.63 -2.0 482,722 + DVU0426 0.66 -1.6 482,730 - DVU0426 0.67 -1.3 482,730 - DVU0426 0.67 -1.6 482,743 + DVU0426 0.68 -2.9 482,749 - DVU0426 0.68 -1.6 482,768 + DVU0426 0.70 -1.2 482,846 + DVU0426 0.76 -1.6 482,934 - DVU0426 0.82 -2.1 482,970 + DVU0426 0.85 -0.9 482,978 - DVU0426 0.85 -0.3 483,002 + DVU0426 0.87 -0.5 483,029 - DVU0426 0.89 -0.9 483,039 + DVU0426 0.90 -1.1 483,039 + DVU0426 0.90 -1.7 483,140 + -1.3 483,149 - -0.7 483,220 - +8.7 483,226 + -0.8 483,234 - +3.2 483,403 - +3.2 483,403 - +1.1 483,487 + +0.2 483,560 - +2.5 483,565 + +0.7 483,565 - +2.5 483,587 + +0.8 483,619 - +2.7 483,637 + -0.4 483,644 + -0.5 483,759 - DVU0428 0.33 +3.4 483,780 + DVU0428 0.39 +1.1 483,846 - DVU0428 0.60 +2.2 483,892 + DVU0428 0.74 +1.0 483,977 + +2.3 483,977 + +1.5 483,985 - +2.6 484,052 - +2.3 484,087 + +1.0 484,100 + +1.2 484,108 - +1.3 484,111 + +2.1 484,169 + +1.8
Or see this region's nucleotide sequence