Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0307 and DVU0308 are separated by 391 nucleotides DVU0308 and DVU0309 are separated by 92 nucleotides
DVU0307: DVU0307 - flagella basal body rod domain protein (TIGR), at 351,441 to 352,937
DVU0307
DVU0308: DVU0308 - membrane protein, putative (TIGR), at 353,329 to 353,763
DVU0308
DVU0309: DVU0309 - transcriptional regulator, LysR family (TIGR), at 353,856 to 354,776
DVU0309
Position (kb) 353
354 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 352.410 kb on - strand, within DVU0307 at 352.436 kb on - strand, within DVU0307 at 352.453 kb on - strand, within DVU0307 at 352.555 kb on + strand, within DVU0307 at 352.594 kb on + strand, within DVU0307 at 352.594 kb on + strand, within DVU0307 at 352.639 kb on - strand, within DVU0307 at 352.639 kb on - strand, within DVU0307 at 352.718 kb on - strand, within DVU0307 at 352.771 kb on - strand, within DVU0307 at 352.809 kb on - strand at 352.963 kb on + strand at 352.981 kb on - strand at 352.996 kb on - strand at 353.047 kb on + strand at 353.184 kb on + strand at 353.344 kb on - strand at 353.371 kb on + strand at 353.403 kb on - strand, within DVU0308 at 353.412 kb on + strand, within DVU0308 at 353.434 kb on - strand, within DVU0308 at 353.458 kb on + strand, within DVU0308 at 353.579 kb on + strand, within DVU0308 at 353.829 kb on - strand at 353.856 kb on + strand at 353.864 kb on - strand at 353.864 kb on - strand at 353.952 kb on + strand, within DVU0309 at 354.021 kb on + strand, within DVU0309 at 354.021 kb on + strand, within DVU0309 at 354.061 kb on - strand, within DVU0309 at 354.111 kb on - strand, within DVU0309 at 354.116 kb on + strand, within DVU0309 at 354.170 kb on - strand, within DVU0309 at 354.177 kb on - strand, within DVU0309 at 354.219 kb on - strand, within DVU0309 at 354.259 kb on + strand, within DVU0309 at 354.344 kb on + strand, within DVU0309 at 354.398 kb on + strand, within DVU0309 at 354.499 kb on - strand, within DVU0309 at 354.520 kb on + strand, within DVU0309 at 354.538 kb on - strand, within DVU0309 at 354.539 kb on + strand, within DVU0309 at 354.583 kb on + strand, within DVU0309 at 354.591 kb on - strand, within DVU0309 at 354.596 kb on - strand, within DVU0309 at 354.598 kb on + strand, within DVU0309 at 354.624 kb on - strand, within DVU0309 at 354.663 kb on - strand, within DVU0309 at 354.683 kb on - strand, within DVU0309 at 354.701 kb on - strand at 354.701 kb on - strand at 354.712 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 352,410 - DVU0307 0.65 +0.2 352,436 - DVU0307 0.66 -0.0 352,453 - DVU0307 0.68 +0.0 352,555 + DVU0307 0.74 +0.7 352,594 + DVU0307 0.77 -0.3 352,594 + DVU0307 0.77 +1.0 352,639 - DVU0307 0.80 -0.4 352,639 - DVU0307 0.80 +0.3 352,718 - DVU0307 0.85 +0.7 352,771 - DVU0307 0.89 +0.9 352,809 - +0.9 352,963 + -0.3 352,981 - +0.3 352,996 - -0.9 353,047 + +0.3 353,184 + -0.3 353,344 - +0.2 353,371 + -1.0 353,403 - DVU0308 0.17 -0.6 353,412 + DVU0308 0.19 -0.7 353,434 - DVU0308 0.24 -2.2 353,458 + DVU0308 0.30 +0.1 353,579 + DVU0308 0.57 -0.9 353,829 - -0.9 353,856 + -0.8 353,864 - +0.7 353,864 - -0.7 353,952 + DVU0309 0.10 +0.3 354,021 + DVU0309 0.18 -0.4 354,021 + DVU0309 0.18 -0.1 354,061 - DVU0309 0.22 -0.1 354,111 - DVU0309 0.28 -0.5 354,116 + DVU0309 0.28 -1.1 354,170 - DVU0309 0.34 +0.4 354,177 - DVU0309 0.35 +0.3 354,219 - DVU0309 0.39 +0.1 354,259 + DVU0309 0.44 +2.3 354,344 + DVU0309 0.53 +1.7 354,398 + DVU0309 0.59 -1.0 354,499 - DVU0309 0.70 -0.9 354,520 + DVU0309 0.72 +0.2 354,538 - DVU0309 0.74 +0.1 354,539 + DVU0309 0.74 -0.3 354,583 + DVU0309 0.79 -0.0 354,591 - DVU0309 0.80 -0.5 354,596 - DVU0309 0.80 -2.8 354,598 + DVU0309 0.81 -0.7 354,624 - DVU0309 0.83 -1.4 354,663 - DVU0309 0.88 -0.4 354,683 - DVU0309 0.90 -0.7 354,701 - -0.6 354,701 - -0.8 354,712 - -0.1
Or see this region's nucleotide sequence