Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0266 and DVU0269 are separated by 541 nucleotides DVU0269 and DVU0270 are separated by 239 nucleotides
DVU0266: DVU0266 - hypothetical protein (TIGR), at 308,428 to 309,684
DVU0266
DVU0269: DVU0269 - transcriptional regulator, rrf2 protein, putative (TIGR), at 310,226 to 310,723
DVU0269
DVU0270: DVU0270 - sensory box histidine kinase (TIGR), at 310,963 to 313,233
DVU0270
Position (kb) 310
311 Strain fitness (log2 ratio) -2
-1
0
1 at 309.734 kb on + strand at 309.916 kb on + strand at 309.929 kb on - strand at 309.942 kb on + strand at 309.950 kb on - strand at 310.119 kb on - strand at 310.197 kb on - strand at 310.221 kb on + strand at 310.285 kb on - strand, within DVU0269 at 310.355 kb on + strand, within DVU0269 at 310.416 kb on + strand, within DVU0269 at 310.416 kb on + strand, within DVU0269 at 310.507 kb on + strand, within DVU0269 at 310.547 kb on - strand, within DVU0269 at 310.673 kb on + strand, within DVU0269 at 310.733 kb on + strand at 310.734 kb on + strand at 310.791 kb on + strand at 310.818 kb on + strand at 310.818 kb on + strand at 310.818 kb on + strand at 310.826 kb on - strand at 310.924 kb on - strand at 310.934 kb on + strand at 310.968 kb on - strand at 310.978 kb on - strand at 311.006 kb on - strand at 311.044 kb on + strand at 311.109 kb on - strand at 311.109 kb on - strand at 311.119 kb on - strand at 311.124 kb on + strand at 311.124 kb on + strand at 311.124 kb on + strand at 311.124 kb on + strand at 311.153 kb on + strand at 311.203 kb on - strand, within DVU0270 at 311.417 kb on + strand, within DVU0270 at 311.418 kb on + strand, within DVU0270 at 311.450 kb on - strand, within DVU0270 at 311.498 kb on + strand, within DVU0270 at 311.525 kb on - strand, within DVU0270 at 311.694 kb on + strand, within DVU0270 at 311.694 kb on + strand, within DVU0270 at 311.694 kb on + strand, within DVU0270 at 311.702 kb on - strand, within DVU0270 at 311.702 kb on - strand, within DVU0270 at 311.702 kb on - strand, within DVU0270
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 309,734 + -0.2 309,916 + -0.2 309,929 - -0.2 309,942 + -0.2 309,950 - +1.0 310,119 - -1.3 310,197 - +0.2 310,221 + -0.7 310,285 - DVU0269 0.12 -2.0 310,355 + DVU0269 0.26 -2.2 310,416 + DVU0269 0.38 -2.2 310,416 + DVU0269 0.38 -0.6 310,507 + DVU0269 0.56 -0.8 310,547 - DVU0269 0.64 -0.3 310,673 + DVU0269 0.90 -0.9 310,733 + +0.4 310,734 + +0.2 310,791 + -0.1 310,818 + +0.3 310,818 + -0.4 310,818 + +1.4 310,826 - +0.1 310,924 - +0.4 310,934 + -0.2 310,968 - -0.3 310,978 - -2.4 311,006 - -0.3 311,044 + -0.1 311,109 - +0.5 311,109 - -0.5 311,119 - -1.3 311,124 + +0.2 311,124 + -2.2 311,124 + +0.6 311,124 + -0.0 311,153 + +0.6 311,203 - DVU0270 0.11 -0.3 311,417 + DVU0270 0.20 +0.3 311,418 + DVU0270 0.20 -0.9 311,450 - DVU0270 0.21 -0.4 311,498 + DVU0270 0.24 +0.0 311,525 - DVU0270 0.25 -1.0 311,694 + DVU0270 0.32 -2.0 311,694 + DVU0270 0.32 +0.3 311,694 + DVU0270 0.32 -0.3 311,702 - DVU0270 0.33 -0.5 311,702 - DVU0270 0.33 +0.0 311,702 - DVU0270 0.33 +0.0
Or see this region's nucleotide sequence