Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gid and DVU2351 are separated by 72 nucleotides DVU2351 and DVU2352 are separated by 100 nucleotides
DVU2350: gid - gid protein (TIGR), at 2,445,526 to 2,446,950
gid
DVU2351: DVU2351 - hypothetical protein (TIGR), at 2,447,023 to 2,447,391
DVU2351
DVU2352: DVU2352 - glycosyl transferase, group 2 family protein (TIGR), at 2,447,492 to 2,449,129
DVU2352
Position (kb)
2447
2448 Strain fitness (log2 ratio)
-2
-1
0
1 at 2446.179 kb on + strand, within gid at 2446.219 kb on + strand, within gid at 2446.255 kb on - strand, within gid at 2446.257 kb on + strand, within gid at 2446.281 kb on + strand, within gid at 2446.293 kb on + strand, within gid at 2446.301 kb on - strand, within gid at 2446.301 kb on - strand, within gid at 2446.317 kb on + strand, within gid at 2446.376 kb on + strand, within gid at 2446.381 kb on + strand, within gid at 2446.409 kb on + strand, within gid at 2446.506 kb on + strand, within gid at 2446.512 kb on + strand, within gid at 2446.588 kb on + strand, within gid at 2446.596 kb on - strand, within gid at 2446.596 kb on - strand, within gid at 2446.704 kb on + strand, within gid at 2446.774 kb on - strand, within gid at 2446.817 kb on - strand at 2446.826 kb on + strand at 2446.855 kb on - strand at 2446.924 kb on - strand at 2446.929 kb on - strand at 2447.010 kb on + strand at 2447.044 kb on + strand at 2447.080 kb on - strand, within DVU2351 at 2447.139 kb on - strand, within DVU2351 at 2447.233 kb on + strand, within DVU2351 at 2447.270 kb on - strand, within DVU2351 at 2447.385 kb on + strand at 2447.423 kb on - strand at 2447.423 kb on - strand at 2447.423 kb on - strand at 2447.433 kb on + strand at 2447.447 kb on + strand at 2447.483 kb on + strand at 2447.494 kb on + strand at 2447.502 kb on - strand at 2447.502 kb on - strand at 2447.502 kb on - strand at 2447.512 kb on - strand at 2447.553 kb on + strand at 2447.591 kb on + strand at 2447.638 kb on - strand at 2447.831 kb on + strand, within DVU2352 at 2447.906 kb on + strand, within DVU2352 at 2447.929 kb on - strand, within DVU2352 at 2447.931 kb on + strand, within DVU2352 at 2447.959 kb on + strand, within DVU2352 at 2447.969 kb on + strand, within DVU2352 at 2447.977 kb on - strand, within DVU2352 at 2448.016 kb on + strand, within DVU2352 at 2448.016 kb on - strand, within DVU2352 at 2448.076 kb on + strand, within DVU2352 at 2448.229 kb on + strand, within DVU2352 at 2448.272 kb on - strand, within DVU2352 at 2448.286 kb on + strand, within DVU2352 at 2448.294 kb on - strand, within DVU2352 at 2448.294 kb on - strand, within DVU2352 at 2448.352 kb on + strand, within DVU2352 at 2448.359 kb on + strand, within DVU2352
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 2,446,179 + gid DVU2350 0.46 -1.4 2,446,219 + gid DVU2350 0.49 +0.4 2,446,255 - gid DVU2350 0.51 -0.3 2,446,257 + gid DVU2350 0.51 +0.1 2,446,281 + gid DVU2350 0.53 -0.4 2,446,293 + gid DVU2350 0.54 -0.2 2,446,301 - gid DVU2350 0.54 -1.1 2,446,301 - gid DVU2350 0.54 -0.2 2,446,317 + gid DVU2350 0.56 -0.1 2,446,376 + gid DVU2350 0.60 -0.4 2,446,381 + gid DVU2350 0.60 -0.3 2,446,409 + gid DVU2350 0.62 -0.3 2,446,506 + gid DVU2350 0.69 -0.5 2,446,512 + gid DVU2350 0.69 +0.1 2,446,588 + gid DVU2350 0.75 -0.2 2,446,596 - gid DVU2350 0.75 +0.2 2,446,596 - gid DVU2350 0.75 -0.5 2,446,704 + gid DVU2350 0.83 +0.0 2,446,774 - gid DVU2350 0.88 +0.7 2,446,817 - -0.4 2,446,826 + +0.0 2,446,855 - -1.1 2,446,924 - -0.3 2,446,929 - +0.1 2,447,010 + +0.2 2,447,044 + -0.8 2,447,080 - DVU2351 0.15 -0.9 2,447,139 - DVU2351 0.31 -1.8 2,447,233 + DVU2351 0.57 -0.4 2,447,270 - DVU2351 0.67 +0.5 2,447,385 + -0.7 2,447,423 - -0.4 2,447,423 - -0.3 2,447,423 - -0.1 2,447,433 + -1.9 2,447,447 + +1.1 2,447,483 + -1.2 2,447,494 + -0.7 2,447,502 - -0.1 2,447,502 - -0.7 2,447,502 - -2.1 2,447,512 - -0.3 2,447,553 + -1.1 2,447,591 + +0.6 2,447,638 - -0.4 2,447,831 + DVU2352 0.21 -2.3 2,447,906 + DVU2352 0.25 -0.1 2,447,929 - DVU2352 0.27 -0.7 2,447,931 + DVU2352 0.27 -0.2 2,447,959 + DVU2352 0.29 -0.4 2,447,969 + DVU2352 0.29 -0.4 2,447,977 - DVU2352 0.30 -0.8 2,448,016 + DVU2352 0.32 -0.1 2,448,016 - DVU2352 0.32 -0.1 2,448,076 + DVU2352 0.36 +0.1 2,448,229 + DVU2352 0.45 -0.1 2,448,272 - DVU2352 0.48 +0.3 2,448,286 + DVU2352 0.48 -0.3 2,448,294 - DVU2352 0.49 -0.3 2,448,294 - DVU2352 0.49 +0.1 2,448,352 + DVU2352 0.53 +0.8 2,448,359 + DVU2352 0.53 +0.2
Or see this region's nucleotide sequence