Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pfkA and DVU2062 are separated by 14 nucleotides DVU2062 and DVU2063 overlap by 4 nucleotides
DVU2061: pfkA - 6-phosphofructokinase (TIGR), at 2,136,887 to 2,138,221
pfkA
DVU2062: DVU2062 - ATP-dependent DNA helicase, UvrD/REP family (TIGR), at 2,138,236 to 2,141,694
DVU2062
DVU2063: DVU2063 - conserved hypothetical protein (TIGR), at 2,141,691 to 2,144,645
DVU2063
Position (kb)
2138
2139
2140
2141
2142 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2137.236 kb on + strand, within pfkA at 2137.238 kb on + strand, within pfkA at 2137.361 kb on - strand, within pfkA at 2137.426 kb on + strand, within pfkA at 2137.426 kb on + strand, within pfkA at 2137.444 kb on - strand, within pfkA at 2137.503 kb on - strand, within pfkA at 2137.566 kb on - strand, within pfkA at 2137.647 kb on + strand, within pfkA at 2137.757 kb on + strand, within pfkA at 2137.814 kb on + strand, within pfkA at 2137.837 kb on + strand, within pfkA at 2137.863 kb on - strand, within pfkA at 2137.868 kb on - strand, within pfkA at 2137.875 kb on + strand, within pfkA at 2137.930 kb on + strand, within pfkA at 2137.940 kb on + strand, within pfkA at 2137.948 kb on - strand, within pfkA at 2137.987 kb on + strand, within pfkA at 2138.007 kb on - strand, within pfkA at 2139.600 kb on + strand, within DVU2062 at 2140.125 kb on - strand, within DVU2062 at 2140.711 kb on - strand, within DVU2062 at 2140.817 kb on + strand, within DVU2062 at 2140.827 kb on + strand, within DVU2062 at 2140.943 kb on - strand, within DVU2062 at 2141.055 kb on + strand, within DVU2062 at 2141.376 kb on + strand at 2141.408 kb on + strand at 2141.408 kb on + strand at 2141.431 kb on + strand at 2141.436 kb on + strand at 2141.439 kb on - strand at 2141.536 kb on + strand at 2141.566 kb on + strand at 2141.603 kb on - strand at 2141.625 kb on + strand at 2141.625 kb on - strand at 2141.888 kb on + strand at 2142.003 kb on - strand, within DVU2063 at 2142.495 kb on - strand, within DVU2063 at 2142.671 kb on + strand, within DVU2063
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 2,137,236 + pfkA DVU2061 0.26 -0.2 2,137,238 + pfkA DVU2061 0.26 -0.7 2,137,361 - pfkA DVU2061 0.36 -0.4 2,137,426 + pfkA DVU2061 0.40 -1.5 2,137,426 + pfkA DVU2061 0.40 -1.3 2,137,444 - pfkA DVU2061 0.42 -2.1 2,137,503 - pfkA DVU2061 0.46 -0.8 2,137,566 - pfkA DVU2061 0.51 -1.3 2,137,647 + pfkA DVU2061 0.57 +2.2 2,137,757 + pfkA DVU2061 0.65 -0.7 2,137,814 + pfkA DVU2061 0.69 -0.8 2,137,837 + pfkA DVU2061 0.71 +0.6 2,137,863 - pfkA DVU2061 0.73 -2.2 2,137,868 - pfkA DVU2061 0.73 +1.2 2,137,875 + pfkA DVU2061 0.74 -0.7 2,137,930 + pfkA DVU2061 0.78 -1.0 2,137,940 + pfkA DVU2061 0.79 +0.0 2,137,948 - pfkA DVU2061 0.79 -1.6 2,137,987 + pfkA DVU2061 0.82 -0.5 2,138,007 - pfkA DVU2061 0.84 -0.4 2,139,600 + DVU2062 0.39 +0.2 2,140,125 - DVU2062 0.55 -0.2 2,140,711 - DVU2062 0.72 -0.1 2,140,817 + DVU2062 0.75 -1.8 2,140,827 + DVU2062 0.75 +0.2 2,140,943 - DVU2062 0.78 -1.9 2,141,055 + DVU2062 0.81 -1.1 2,141,376 + -0.5 2,141,408 + -1.3 2,141,408 + +0.5 2,141,431 + -0.6 2,141,436 + -0.4 2,141,439 - -0.6 2,141,536 + -0.1 2,141,566 + -0.8 2,141,603 - -1.1 2,141,625 + -0.0 2,141,625 - +0.2 2,141,888 + -1.0 2,142,003 - DVU2063 0.11 -0.3 2,142,495 - DVU2063 0.27 -1.6 2,142,671 + DVU2063 0.33 +1.3
Or see this region's nucleotide sequence