Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF15206 and DVU2048 are separated by 48 nucleotides DVU2048 and DORF15229 are separated by 47 nucleotides DORF15229 and DVU2049 are separated by 234 nucleotides
DORF15206: DORF15206 - no description, at 2,123,167 to 2,125,602
DORF15206
DVU2048: DVU2048 - hypothetical protein (TIGR), at 2,125,651 to 2,125,821
DVU2048
DORF15229: DORF15229 - no description, at 2,125,869 to 2,126,150
DORF15229
DVU2049: DVU2049 - transposase OrfA, IS3 family, degenerate (TIGR), at 2,126,385 to 2,126,851
DVU2049
Position (kb)
2125
2126 Strain fitness (log2 ratio)
-2
-1
0
1 at 2124.699 kb on + strand, within DORF15206 at 2124.699 kb on + strand, within DORF15206 at 2124.707 kb on - strand, within DORF15206 at 2124.777 kb on - strand, within DORF15206 at 2124.790 kb on + strand, within DORF15206 at 2124.840 kb on + strand, within DORF15206 at 2124.863 kb on + strand, within DORF15206 at 2124.906 kb on - strand, within DORF15206 at 2124.966 kb on - strand, within DORF15206 at 2125.233 kb on - strand, within DORF15206 at 2125.344 kb on - strand, within DORF15206 at 2125.346 kb on + strand, within DORF15206 at 2125.354 kb on - strand, within DORF15206 at 2125.402 kb on - strand at 2125.413 kb on + strand at 2125.414 kb on - strand at 2125.441 kb on - strand at 2125.745 kb on + strand, within DVU2048 at 2126.072 kb on - strand, within DORF15229 at 2126.109 kb on - strand, within DORF15229 at 2126.152 kb on - strand at 2126.213 kb on + strand at 2126.324 kb on - strand at 2126.325 kb on - strand at 2126.325 kb on - strand at 2126.325 kb on - strand at 2126.404 kb on + strand at 2126.409 kb on + strand at 2126.483 kb on - strand, within DVU2049 at 2126.503 kb on + strand, within DVU2049 at 2126.523 kb on + strand, within DVU2049 at 2126.531 kb on - strand, within DVU2049 at 2126.645 kb on + strand, within DVU2049 at 2126.683 kb on - strand, within DVU2049 at 2126.691 kb on + strand, within DVU2049 at 2126.698 kb on + strand, within DVU2049
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 2,124,699 + DORF15206 0.63 +0.2 2,124,699 + DORF15206 0.63 -0.0 2,124,707 - DORF15206 0.63 +0.4 2,124,777 - DORF15206 0.66 +1.2 2,124,790 + DORF15206 0.67 +0.2 2,124,840 + DORF15206 0.69 -0.8 2,124,863 + DORF15206 0.70 -1.3 2,124,906 - DORF15206 0.71 -0.5 2,124,966 - DORF15206 0.74 +0.1 2,125,233 - DORF15206 0.85 -0.6 2,125,344 - DORF15206 0.89 +0.3 2,125,346 + DORF15206 0.89 -0.0 2,125,354 - DORF15206 0.90 -0.4 2,125,402 - -0.6 2,125,413 + +0.7 2,125,414 - -0.0 2,125,441 - +0.6 2,125,745 + DVU2048 0.55 -2.6 2,126,072 - DORF15229 0.72 -0.8 2,126,109 - DORF15229 0.85 -0.3 2,126,152 - +0.0 2,126,213 + -0.1 2,126,324 - +0.0 2,126,325 - -0.2 2,126,325 - +0.2 2,126,325 - +0.2 2,126,404 + +0.1 2,126,409 + -2.1 2,126,483 - DVU2049 0.21 +0.4 2,126,503 + DVU2049 0.25 -0.0 2,126,523 + DVU2049 0.30 -0.8 2,126,531 - DVU2049 0.31 +0.2 2,126,645 + DVU2049 0.56 +0.1 2,126,683 - DVU2049 0.64 -0.0 2,126,691 + DVU2049 0.66 -0.3 2,126,698 + DVU2049 0.67 +0.3
Or see this region's nucleotide sequence