Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fragments and DVU0965 are separated by 239 nucleotides DVU0965 and DVU0966 are separated by 94 nucleotides
DVU0964: fragments - Glu/Leu/Phe/Val dehydrogenase family protein (TIGR), at 1,059,674 to 1,062,667
fragments
DVU0965: DVU0965 - hypothetical protein (TIGR), at 1,062,907 to 1,063,083
DVU0965
DVU0966: DVU0966 - amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR), at 1,063,178 to 1,063,996
DVU0966
Position (kb)
1062
1063
1064 Strain fitness (log2 ratio)
-2
-1
0
1 at 1061.951 kb on + strand, within fragments at 1062.030 kb on + strand, within fragments at 1062.082 kb on - strand, within fragments at 1062.082 kb on - strand, within fragments at 1062.082 kb on - strand, within fragments at 1062.082 kb on - strand, within fragments at 1062.088 kb on + strand, within fragments at 1062.242 kb on - strand, within fragments at 1062.269 kb on + strand, within fragments at 1062.334 kb on - strand, within fragments at 1062.424 kb on + strand at 1062.454 kb on + strand at 1062.705 kb on + strand at 1062.707 kb on + strand at 1062.707 kb on - strand at 1062.754 kb on + strand at 1062.757 kb on - strand at 1062.757 kb on - strand at 1062.897 kb on + strand at 1062.911 kb on - strand at 1062.963 kb on + strand, within DVU0965 at 1063.038 kb on - strand, within DVU0965 at 1063.060 kb on + strand, within DVU0965 at 1063.125 kb on + strand at 1063.126 kb on - strand at 1063.133 kb on - strand at 1063.133 kb on - strand at 1063.133 kb on - strand at 1063.133 kb on - strand at 1063.150 kb on - strand at 1063.184 kb on - strand at 1063.203 kb on - strand at 1063.540 kb on + strand, within DVU0966 at 1063.610 kb on + strand, within DVU0966 at 1063.615 kb on + strand, within DVU0966 at 1063.615 kb on + strand, within DVU0966 at 1063.618 kb on - strand, within DVU0966 at 1063.618 kb on - strand, within DVU0966 at 1063.628 kb on - strand, within DVU0966 at 1063.635 kb on - strand, within DVU0966 at 1063.684 kb on + strand, within DVU0966 at 1063.762 kb on + strand, within DVU0966 at 1063.810 kb on + strand, within DVU0966 at 1063.810 kb on + strand, within DVU0966 at 1063.812 kb on - strand, within DVU0966 at 1063.812 kb on - strand, within DVU0966 at 1063.818 kb on - strand, within DVU0966 at 1063.818 kb on - strand, within DVU0966 at 1064.021 kb on - strand at 1064.026 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 1,061,951 + fragments DVU0964 0.76 +0.5 1,062,030 + fragments DVU0964 0.79 +0.1 1,062,082 - fragments DVU0964 0.80 +0.6 1,062,082 - fragments DVU0964 0.80 +0.0 1,062,082 - fragments DVU0964 0.80 +0.6 1,062,082 - fragments DVU0964 0.80 +0.5 1,062,088 + fragments DVU0964 0.81 +0.9 1,062,242 - fragments DVU0964 0.86 -1.2 1,062,269 + fragments DVU0964 0.87 -0.1 1,062,334 - fragments DVU0964 0.89 +0.4 1,062,424 + +0.5 1,062,454 + -0.2 1,062,705 + -0.7 1,062,707 + -0.1 1,062,707 - -1.1 1,062,754 + -0.5 1,062,757 - -0.5 1,062,757 - -0.4 1,062,897 + +1.0 1,062,911 - -0.3 1,062,963 + DVU0965 0.32 -0.3 1,063,038 - DVU0965 0.74 -1.1 1,063,060 + DVU0965 0.86 -0.3 1,063,125 + +0.9 1,063,126 - -0.2 1,063,133 - -0.1 1,063,133 - -0.1 1,063,133 - +0.2 1,063,133 - +0.1 1,063,150 - +0.6 1,063,184 - -0.6 1,063,203 - -0.2 1,063,540 + DVU0966 0.44 -0.9 1,063,610 + DVU0966 0.53 +1.1 1,063,615 + DVU0966 0.53 -2.2 1,063,615 + DVU0966 0.53 +0.5 1,063,618 - DVU0966 0.54 +0.2 1,063,618 - DVU0966 0.54 -0.2 1,063,628 - DVU0966 0.55 -0.3 1,063,635 - DVU0966 0.56 -0.3 1,063,684 + DVU0966 0.62 +0.0 1,063,762 + DVU0966 0.71 +0.5 1,063,810 + DVU0966 0.77 -0.1 1,063,810 + DVU0966 0.77 -0.0 1,063,812 - DVU0966 0.77 -0.1 1,063,812 - DVU0966 0.77 +0.0 1,063,818 - DVU0966 0.78 +0.1 1,063,818 - DVU0966 0.78 -0.7 1,064,021 - +0.1 1,064,026 - -0.1
Or see this region's nucleotide sequence