Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0670 and DVU0671 are separated by 159 nucleotides DVU0671 and DVU0672 are separated by 157 nucleotides DVU0672 and DVU0673 are separated by 50 nucleotides DVU0673 and DVU0674 are separated by 348 nucleotides
DVU0670: DVU0670 - exopolysaccharide production protein, putative (TIGR), at 742,386 to 743,657
DVU0670
DVU0671: DVU0671 - conserved hypothetical protein (TIGR), at 743,817 to 745,454
DVU0671
DVU0672: DVU0672 - hypothetical protein (TIGR), at 745,612 to 745,764
DVU0672
DVU0673: DVU0673 - hypothetical protein (TIGR), at 745,815 to 745,982
DVU0673
DVU0674: DVU0674 - ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 746,331 to 747,146
DVU0674
Position (kb) 743
744
745
746 Strain fitness (log2 ratio) -2
-1
0
1 at 743.030 kb on + strand, within DVU0670 at 743.266 kb on + strand, within DVU0670 at 743.508 kb on + strand, within DVU0670 at 743.625 kb on - strand at 743.658 kb on + strand at 743.693 kb on - strand at 743.808 kb on + strand at 743.816 kb on - strand at 743.835 kb on - strand at 743.852 kb on + strand at 743.890 kb on + strand at 743.956 kb on + strand at 743.972 kb on + strand at 743.993 kb on + strand, within DVU0671 at 744.016 kb on + strand, within DVU0671 at 744.123 kb on - strand, within DVU0671 at 744.123 kb on - strand, within DVU0671 at 744.146 kb on + strand, within DVU0671 at 744.147 kb on - strand, within DVU0671 at 744.233 kb on + strand, within DVU0671 at 744.263 kb on - strand, within DVU0671 at 744.366 kb on + strand, within DVU0671 at 744.366 kb on - strand, within DVU0671 at 744.463 kb on - strand, within DVU0671 at 744.468 kb on - strand, within DVU0671 at 744.544 kb on - strand, within DVU0671 at 744.590 kb on - strand, within DVU0671 at 744.613 kb on + strand, within DVU0671 at 744.616 kb on - strand, within DVU0671 at 744.660 kb on + strand, within DVU0671 at 744.727 kb on - strand, within DVU0671 at 744.810 kb on - strand, within DVU0671 at 744.855 kb on + strand, within DVU0671 at 744.873 kb on - strand, within DVU0671 at 744.981 kb on + strand, within DVU0671 at 745.059 kb on - strand, within DVU0671 at 745.083 kb on - strand, within DVU0671 at 745.125 kb on - strand, within DVU0671 at 745.156 kb on + strand, within DVU0671 at 745.174 kb on - strand, within DVU0671 at 745.337 kb on + strand at 745.354 kb on + strand at 745.360 kb on - strand at 745.375 kb on + strand at 745.375 kb on + strand at 745.417 kb on - strand at 745.449 kb on + strand at 746.086 kb on + strand at 746.094 kb on - strand at 746.153 kb on + strand at 746.158 kb on + strand at 746.166 kb on - strand at 746.206 kb on - strand at 746.211 kb on - strand at 746.223 kb on - strand at 746.295 kb on + strand at 746.392 kb on - strand at 746.411 kb on + strand at 746.431 kb on + strand, within DVU0674 at 746.445 kb on + strand, within DVU0674 at 746.445 kb on + strand, within DVU0674 at 746.449 kb on - strand, within DVU0674
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 743,030 + DVU0670 0.51 +0.2 743,266 + DVU0670 0.69 +1.4 743,508 + DVU0670 0.88 +0.2 743,625 - -0.6 743,658 + +0.3 743,693 - -0.3 743,808 + -0.4 743,816 - -1.9 743,835 - -0.9 743,852 + -0.8 743,890 + -0.8 743,956 + -1.3 743,972 + -1.1 743,993 + DVU0671 0.11 -0.2 744,016 + DVU0671 0.12 -1.7 744,123 - DVU0671 0.19 +0.1 744,123 - DVU0671 0.19 -0.5 744,146 + DVU0671 0.20 -0.6 744,147 - DVU0671 0.20 -0.8 744,233 + DVU0671 0.25 -2.1 744,263 - DVU0671 0.27 -0.5 744,366 + DVU0671 0.34 +0.3 744,366 - DVU0671 0.34 -0.5 744,463 - DVU0671 0.39 -0.7 744,468 - DVU0671 0.40 -1.3 744,544 - DVU0671 0.44 -0.2 744,590 - DVU0671 0.47 -2.3 744,613 + DVU0671 0.49 -1.9 744,616 - DVU0671 0.49 -0.7 744,660 + DVU0671 0.51 -1.6 744,727 - DVU0671 0.56 -1.1 744,810 - DVU0671 0.61 -1.0 744,855 + DVU0671 0.63 -0.9 744,873 - DVU0671 0.64 -0.5 744,981 + DVU0671 0.71 -1.6 745,059 - DVU0671 0.76 -2.7 745,083 - DVU0671 0.77 -2.2 745,125 - DVU0671 0.80 -1.3 745,156 + DVU0671 0.82 -0.9 745,174 - DVU0671 0.83 -1.1 745,337 + -0.9 745,354 + -0.5 745,360 - +0.6 745,375 + -0.7 745,375 + -2.2 745,417 - -1.4 745,449 + -1.4 746,086 + +0.3 746,094 - +0.6 746,153 + +0.2 746,158 + +0.2 746,166 - +0.1 746,206 - -0.2 746,211 - +0.2 746,223 - -0.2 746,295 + -0.0 746,392 - -0.9 746,411 + +0.1 746,431 + DVU0674 0.12 -1.7 746,445 + DVU0674 0.14 +0.1 746,445 + DVU0674 0.14 -0.0 746,449 - DVU0674 0.14 -0.2
Or see this region's nucleotide sequence