Experiment: Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0268 and BT0269 are separated by 33 nucleotides BT0269 and BT0270 are separated by 13 nucleotides BT0270 and BT0271 are separated by 142 nucleotides
BT0268: BT0268 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 304,251 to 307,184
BT0268
BT0269: BT0269 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 307,218 to 308,756
BT0269
BT0270: BT0270 - hypothetical protein (NCBI ptt file), at 308,770 to 309,564
BT0270
BT0271: BT0271 - hypothetical protein (NCBI ptt file), at 309,707 to 310,582
BT0271
Position (kb) 307
308
309 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 306.242 kb on + strand, within BT0268 at 306.303 kb on + strand, within BT0268 at 306.525 kb on - strand, within BT0268 at 306.584 kb on - strand, within BT0268 at 306.638 kb on + strand, within BT0268 at 306.690 kb on + strand, within BT0268 at 306.843 kb on - strand, within BT0268 at 306.894 kb on + strand at 306.895 kb on - strand at 307.002 kb on - strand at 307.019 kb on + strand at 307.023 kb on - strand at 307.384 kb on - strand, within BT0269 at 307.384 kb on - strand, within BT0269 at 307.429 kb on + strand, within BT0269 at 307.497 kb on - strand, within BT0269 at 307.623 kb on + strand, within BT0269 at 307.728 kb on + strand, within BT0269 at 307.729 kb on - strand, within BT0269 at 307.839 kb on + strand, within BT0269 at 307.975 kb on - strand, within BT0269 at 307.991 kb on - strand, within BT0269 at 308.028 kb on - strand, within BT0269 at 308.177 kb on - strand, within BT0269 at 308.218 kb on + strand, within BT0269 at 308.267 kb on + strand, within BT0269 at 308.278 kb on - strand, within BT0269 at 308.286 kb on + strand, within BT0269 at 308.286 kb on + strand, within BT0269 at 308.289 kb on + strand, within BT0269 at 308.290 kb on - strand, within BT0269 at 308.441 kb on - strand, within BT0269 at 308.649 kb on - strand at 308.688 kb on + strand at 308.709 kb on - strand at 308.781 kb on - strand at 308.852 kb on - strand, within BT0270 at 308.852 kb on - strand, within BT0270 at 309.010 kb on - strand, within BT0270 at 309.037 kb on - strand, within BT0270 at 309.114 kb on - strand, within BT0270 at 309.206 kb on - strand, within BT0270 at 309.208 kb on - strand, within BT0270 at 309.313 kb on + strand, within BT0270 at 309.332 kb on + strand, within BT0270 at 309.333 kb on - strand, within BT0270 at 309.563 kb on - strand at 309.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM remove 306,242 + BT0268 0.68 -1.6 306,303 + BT0268 0.70 -3.0 306,525 - BT0268 0.78 -1.0 306,584 - BT0268 0.80 -3.6 306,638 + BT0268 0.81 -1.6 306,690 + BT0268 0.83 -1.0 306,843 - BT0268 0.88 -0.9 306,894 + -2.3 306,895 - +0.4 307,002 - -1.0 307,019 + -2.6 307,023 - +0.4 307,384 - BT0269 0.11 -2.6 307,384 - BT0269 0.11 +0.0 307,429 + BT0269 0.14 -2.7 307,497 - BT0269 0.18 +0.0 307,623 + BT0269 0.26 -1.6 307,728 + BT0269 0.33 -2.0 307,729 - BT0269 0.33 -2.0 307,839 + BT0269 0.40 +0.0 307,975 - BT0269 0.49 -2.0 307,991 - BT0269 0.50 -2.0 308,028 - BT0269 0.53 -2.8 308,177 - BT0269 0.62 +3.0 308,218 + BT0269 0.65 -2.8 308,267 + BT0269 0.68 +0.0 308,278 - BT0269 0.69 -1.8 308,286 + BT0269 0.69 -1.6 308,286 + BT0269 0.69 -2.3 308,289 + BT0269 0.70 -1.6 308,290 - BT0269 0.70 -1.0 308,441 - BT0269 0.79 -0.7 308,649 - -1.6 308,688 + +1.0 308,709 - +0.0 308,781 - -2.3 308,852 - BT0270 0.10 -0.6 308,852 - BT0270 0.10 -1.0 309,010 - BT0270 0.30 +0.0 309,037 - BT0270 0.34 -1.7 309,114 - BT0270 0.43 -1.6 309,206 - BT0270 0.55 -2.0 309,208 - BT0270 0.55 -2.8 309,313 + BT0270 0.68 -1.6 309,332 + BT0270 0.71 -2.6 309,333 - BT0270 0.71 -2.8 309,563 - -0.8 309,598 - -3.4
Or see this region's nucleotide sequence