Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5605 and Pf6N2E2_5606 are separated by 244 nucleotides Pf6N2E2_5606 and Pf6N2E2_5607 are separated by 50 nucleotides Pf6N2E2_5607 and Pf6N2E2_5608 are separated by 226 nucleotides
Pf6N2E2_5605 - FxsA protein, at 6,420,366 to 6,420,842
_5605
Pf6N2E2_5606 - Heat shock protein 60 family co-chaperone GroES, at 6,421,087 to 6,421,380
_5606
Pf6N2E2_5607 - Heat shock protein 60 family chaperone GroEL, at 6,421,431 to 6,423,074
_5607
Pf6N2E2_5608 - PAP2 superfamily protein, at 6,423,301 to 6,424,044
_5608
Position (kb)
6421
6422
6423
6424 Strain fitness (log2 ratio)
-1
0
1
2 at 6420.785 kb on + strand, within Pf6N2E2_5605 at 6420.840 kb on + strand at 6420.840 kb on + strand at 6420.841 kb on - strand at 6420.841 kb on - strand at 6420.920 kb on + strand at 6420.920 kb on + strand at 6420.920 kb on + strand at 6420.939 kb on + strand at 6420.943 kb on + strand at 6420.943 kb on + strand at 6421.031 kb on + strand at 6423.072 kb on + strand at 6423.072 kb on + strand at 6423.072 kb on + strand at 6423.144 kb on + strand at 6423.144 kb on + strand at 6423.328 kb on + strand at 6423.328 kb on + strand at 6423.329 kb on - strand at 6423.329 kb on - strand at 6423.365 kb on + strand at 6423.365 kb on + strand at 6423.365 kb on + strand at 6423.365 kb on + strand at 6423.365 kb on + strand at 6423.366 kb on - strand at 6423.366 kb on - strand at 6423.371 kb on + strand at 6423.371 kb on + strand at 6423.372 kb on - strand at 6423.632 kb on + strand, within Pf6N2E2_5608 at 6423.633 kb on - strand, within Pf6N2E2_5608 at 6423.633 kb on - strand, within Pf6N2E2_5608 at 6423.633 kb on - strand, within Pf6N2E2_5608 at 6423.820 kb on + strand, within Pf6N2E2_5608 at 6423.820 kb on + strand, within Pf6N2E2_5608 at 6423.820 kb on + strand, within Pf6N2E2_5608 at 6423.821 kb on - strand, within Pf6N2E2_5608 at 6423.885 kb on + strand, within Pf6N2E2_5608 at 6423.885 kb on + strand, within Pf6N2E2_5608 at 6423.886 kb on - strand, within Pf6N2E2_5608 at 6423.908 kb on + strand, within Pf6N2E2_5608 at 6423.953 kb on - strand, within Pf6N2E2_5608 at 6424.051 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 6,420,785 + Pf6N2E2_5605 0.88 +0.2 6,420,840 + +0.4 6,420,840 + +0.8 6,420,841 - +0.2 6,420,841 - +0.6 6,420,920 + -0.7 6,420,920 + +0.4 6,420,920 + +0.3 6,420,939 + +0.1 6,420,943 + +1.2 6,420,943 + +0.8 6,421,031 + -0.6 6,423,072 + +0.4 6,423,072 + +1.8 6,423,072 + +1.4 6,423,144 + +0.9 6,423,144 + +0.5 6,423,328 + +0.4 6,423,328 + +0.1 6,423,329 - +0.4 6,423,329 - -0.8 6,423,365 + +0.6 6,423,365 + +0.5 6,423,365 + +0.4 6,423,365 + +0.8 6,423,365 + +0.2 6,423,366 - +0.4 6,423,366 - +0.1 6,423,371 + +0.2 6,423,371 + +0.2 6,423,372 - -0.3 6,423,632 + Pf6N2E2_5608 0.44 +1.6 6,423,633 - Pf6N2E2_5608 0.45 +0.7 6,423,633 - Pf6N2E2_5608 0.45 -0.1 6,423,633 - Pf6N2E2_5608 0.45 +0.2 6,423,820 + Pf6N2E2_5608 0.70 -0.9 6,423,820 + Pf6N2E2_5608 0.70 +0.9 6,423,820 + Pf6N2E2_5608 0.70 -0.6 6,423,821 - Pf6N2E2_5608 0.70 +0.1 6,423,885 + Pf6N2E2_5608 0.78 -0.2 6,423,885 + Pf6N2E2_5608 0.78 +1.0 6,423,886 - Pf6N2E2_5608 0.79 +0.0 6,423,908 + Pf6N2E2_5608 0.82 -0.5 6,423,953 - Pf6N2E2_5608 0.88 -0.0 6,424,051 - -0.2
Or see this region's nucleotide sequence