Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf6N2E2_3416 - FIG00923625: hypothetical protein, at 3,962,252 to 3,963,151
_3416
Position (kb)
3962
3963
3964 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3961.269 kb on + strand at 3961.270 kb on - strand at 3961.290 kb on + strand at 3961.290 kb on + strand at 3961.290 kb on + strand at 3961.290 kb on + strand at 3961.290 kb on + strand at 3961.290 kb on + strand at 3961.290 kb on + strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.291 kb on - strand at 3961.292 kb on + strand at 3961.293 kb on - strand at 3961.293 kb on - strand at 3961.308 kb on + strand at 3961.452 kb on + strand at 3961.452 kb on + strand at 3961.565 kb on + strand at 3961.565 kb on + strand at 3961.565 kb on + strand at 3961.565 kb on + strand at 3961.566 kb on - strand at 3961.566 kb on - strand at 3961.566 kb on - strand at 3961.566 kb on - strand at 3961.596 kb on + strand at 3961.597 kb on - strand at 3961.617 kb on + strand at 3961.617 kb on + strand at 3961.618 kb on - strand at 3961.618 kb on - strand at 3961.618 kb on - strand at 3961.630 kb on - strand at 3961.630 kb on - strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.634 kb on + strand at 3961.635 kb on - strand at 3961.635 kb on - strand at 3961.635 kb on - strand at 3961.635 kb on - strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.657 kb on + strand at 3961.658 kb on - strand at 3961.658 kb on - strand at 3961.658 kb on - strand at 3961.670 kb on + strand at 3961.670 kb on + strand at 3961.671 kb on - strand at 3961.671 kb on - strand at 3961.671 kb on - strand at 3961.711 kb on + strand at 3961.711 kb on + strand at 3961.712 kb on - strand at 3961.712 kb on - strand at 3961.712 kb on - strand at 3961.712 kb on - strand at 3961.712 kb on - strand at 3961.810 kb on - strand at 3961.810 kb on - strand at 3961.810 kb on - strand at 3961.965 kb on - strand at 3962.027 kb on - strand at 3962.061 kb on + strand at 3962.061 kb on + strand at 3962.061 kb on + strand at 3962.062 kb on - strand at 3962.062 kb on - strand at 3962.062 kb on - strand at 3962.062 kb on - strand at 3962.062 kb on - strand at 3962.069 kb on + strand at 3962.069 kb on + strand at 3962.070 kb on - strand at 3962.070 kb on - strand at 3962.070 kb on - strand at 3962.070 kb on - strand at 3962.153 kb on + strand at 3962.153 kb on + strand at 3962.153 kb on + strand at 3962.153 kb on + strand at 3962.153 kb on + strand at 3962.153 kb on + strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.154 kb on - strand at 3962.157 kb on + strand at 3962.157 kb on + strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.158 kb on - strand at 3962.185 kb on + strand at 3962.186 kb on - strand at 3962.186 kb on - strand at 3962.229 kb on - strand at 3962.229 kb on - strand at 3962.229 kb on - strand at 3962.229 kb on - strand at 3962.300 kb on + strand at 3962.301 kb on - strand at 3962.301 kb on - strand at 3962.301 kb on - strand at 3962.301 kb on - strand at 3962.301 kb on - strand at 3962.365 kb on - strand, within Pf6N2E2_3416 at 3962.365 kb on - strand, within Pf6N2E2_3416 at 3962.365 kb on - strand, within Pf6N2E2_3416 at 3962.365 kb on - strand, within Pf6N2E2_3416 at 3962.389 kb on + strand, within Pf6N2E2_3416 at 3962.390 kb on - strand, within Pf6N2E2_3416 at 3962.390 kb on - strand, within Pf6N2E2_3416 at 3962.390 kb on - strand, within Pf6N2E2_3416 at 3962.464 kb on + strand, within Pf6N2E2_3416 at 3962.535 kb on + strand, within Pf6N2E2_3416 at 3962.550 kb on - strand, within Pf6N2E2_3416 at 3962.550 kb on - strand, within Pf6N2E2_3416 at 3962.550 kb on - strand, within Pf6N2E2_3416 at 3962.692 kb on + strand, within Pf6N2E2_3416 at 3962.693 kb on - strand, within Pf6N2E2_3416 at 3962.693 kb on - strand, within Pf6N2E2_3416 at 3962.767 kb on - strand, within Pf6N2E2_3416 at 3962.781 kb on - strand, within Pf6N2E2_3416 at 3962.821 kb on - strand, within Pf6N2E2_3416 at 3962.821 kb on - strand, within Pf6N2E2_3416 at 3962.821 kb on - strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.840 kb on + strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.841 kb on - strand, within Pf6N2E2_3416 at 3962.842 kb on + strand, within Pf6N2E2_3416 at 3962.842 kb on + strand, within Pf6N2E2_3416 at 3962.843 kb on - strand, within Pf6N2E2_3416 at 3962.843 kb on - strand, within Pf6N2E2_3416 at 3962.873 kb on + strand, within Pf6N2E2_3416 at 3962.992 kb on + strand, within Pf6N2E2_3416 at 3962.992 kb on + strand, within Pf6N2E2_3416 at 3962.992 kb on + strand, within Pf6N2E2_3416 at 3962.993 kb on - strand, within Pf6N2E2_3416 at 3962.993 kb on - strand, within Pf6N2E2_3416 at 3962.993 kb on - strand, within Pf6N2E2_3416 at 3963.014 kb on + strand, within Pf6N2E2_3416 at 3963.014 kb on + strand, within Pf6N2E2_3416 at 3963.015 kb on - strand, within Pf6N2E2_3416 at 3963.015 kb on - strand, within Pf6N2E2_3416 at 3963.015 kb on - strand, within Pf6N2E2_3416 at 3963.015 kb on - strand, within Pf6N2E2_3416 at 3963.015 kb on - strand, within Pf6N2E2_3416 at 3963.160 kb on - strand at 3963.163 kb on + strand at 3963.163 kb on + strand at 3963.163 kb on + strand at 3963.163 kb on + strand at 3963.164 kb on - strand at 3963.164 kb on - strand at 3963.183 kb on + strand at 3963.184 kb on - strand at 3963.186 kb on - strand at 3963.346 kb on - strand at 3963.346 kb on - strand at 3963.349 kb on + strand at 3963.352 kb on - strand at 3963.352 kb on - strand at 3963.352 kb on - strand at 3963.410 kb on - strand at 3963.419 kb on + strand at 3963.420 kb on - strand at 3963.420 kb on - strand at 3963.420 kb on - strand at 3963.423 kb on + strand at 3963.424 kb on - strand at 3963.424 kb on - strand at 3963.443 kb on + strand at 3963.444 kb on - strand at 3963.477 kb on - strand at 3963.477 kb on - strand at 3963.477 kb on - strand at 3963.477 kb on - strand at 3963.511 kb on + strand at 3963.539 kb on - strand at 3963.548 kb on + strand at 3963.549 kb on - strand at 3963.620 kb on + strand at 3963.620 kb on + strand at 3963.620 kb on + strand at 3963.621 kb on - strand at 3963.621 kb on - strand at 3963.621 kb on - strand at 3963.621 kb on - strand at 3963.621 kb on - strand at 3963.621 kb on - strand at 3963.667 kb on - strand at 3963.716 kb on + strand at 3963.717 kb on - strand at 3963.793 kb on + strand at 3963.793 kb on + strand at 3963.793 kb on + strand at 3963.793 kb on + strand at 3963.794 kb on - strand at 3963.794 kb on - strand at 3963.794 kb on - strand at 3963.794 kb on - strand at 3963.794 kb on - strand at 3963.794 kb on - strand at 3963.867 kb on + strand at 3963.868 kb on - strand at 3963.868 kb on - strand at 3963.868 kb on - strand at 3963.868 kb on - strand at 3963.913 kb on + strand at 3963.913 kb on + strand at 3963.913 kb on + strand at 3963.913 kb on + strand at 3963.914 kb on - strand at 3963.914 kb on - strand at 3963.915 kb on + strand at 3963.915 kb on + strand at 3963.946 kb on + strand at 3963.947 kb on - strand at 3963.947 kb on - strand at 3963.947 kb on - strand at 3963.947 kb on - strand at 3963.947 kb on - strand at 3963.947 kb on - strand at 3963.952 kb on + strand at 3963.953 kb on - strand at 3964.032 kb on - strand at 3964.032 kb on - strand at 3964.032 kb on - strand at 3964.032 kb on - strand at 3964.050 kb on + strand at 3964.069 kb on + strand at 3964.070 kb on - strand at 3964.124 kb on + strand at 3964.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,961,269 + +0.9 3,961,270 - +0.2 3,961,290 + +0.1 3,961,290 + +0.9 3,961,290 + -0.4 3,961,290 + +0.0 3,961,290 + -1.6 3,961,290 + -0.8 3,961,290 + -0.6 3,961,291 - +0.6 3,961,291 - +0.3 3,961,291 - +0.8 3,961,291 - +0.6 3,961,291 - +0.0 3,961,291 - -0.9 3,961,291 - +1.2 3,961,291 - +0.8 3,961,291 - -0.2 3,961,291 - -0.2 3,961,292 + -0.9 3,961,293 - +0.7 3,961,293 - +0.6 3,961,308 + +0.8 3,961,452 + -0.1 3,961,452 + -0.1 3,961,565 + +0.1 3,961,565 + -1.2 3,961,565 + +0.3 3,961,565 + +0.8 3,961,566 - +0.2 3,961,566 - +0.8 3,961,566 - +0.7 3,961,566 - +0.1 3,961,596 + +0.4 3,961,597 - +0.2 3,961,617 + +0.6 3,961,617 + +0.0 3,961,618 - -0.8 3,961,618 - +0.3 3,961,618 - +0.1 3,961,630 - -0.3 3,961,630 - -0.3 3,961,634 + +0.2 3,961,634 + -0.7 3,961,634 + -0.3 3,961,634 + -2.2 3,961,634 + +0.5 3,961,634 + +0.5 3,961,634 + +0.7 3,961,634 + +0.6 3,961,635 - +0.6 3,961,635 - +0.6 3,961,635 - +1.3 3,961,635 - -0.6 3,961,657 + +0.0 3,961,657 + +0.1 3,961,657 + -0.7 3,961,657 + +0.0 3,961,657 + +0.2 3,961,657 + +0.8 3,961,657 + +0.1 3,961,657 + -0.6 3,961,657 + +1.8 3,961,657 + -0.5 3,961,658 - +0.8 3,961,658 - +0.6 3,961,658 - +0.7 3,961,670 + +0.1 3,961,670 + -0.5 3,961,671 - +0.7 3,961,671 - -0.8 3,961,671 - +0.0 3,961,711 + +0.6 3,961,711 + -1.0 3,961,712 - -1.0 3,961,712 - -0.0 3,961,712 - +0.1 3,961,712 - +1.3 3,961,712 - +0.7 3,961,810 - -0.2 3,961,810 - -1.7 3,961,810 - -0.7 3,961,965 - +0.2 3,962,027 - +0.8 3,962,061 + +0.0 3,962,061 + +0.5 3,962,061 + +0.6 3,962,062 - +0.3 3,962,062 - +1.3 3,962,062 - +0.7 3,962,062 - +1.8 3,962,062 - +1.9 3,962,069 + +0.8 3,962,069 + +0.5 3,962,070 - +0.6 3,962,070 - +0.8 3,962,070 - +0.3 3,962,070 - -0.4 3,962,153 + -0.6 3,962,153 + -0.6 3,962,153 + -0.3 3,962,153 + +0.1 3,962,153 + -0.7 3,962,153 + +0.8 3,962,154 - +0.9 3,962,154 - -2.1 3,962,154 - +0.6 3,962,154 - +0.5 3,962,154 - -0.8 3,962,154 - +0.1 3,962,154 - -0.0 3,962,154 - +0.6 3,962,154 - -0.4 3,962,154 - -0.8 3,962,154 - +0.4 3,962,154 - +0.4 3,962,157 + +0.9 3,962,157 + +0.2 3,962,158 - +0.2 3,962,158 - +0.0 3,962,158 - +0.7 3,962,158 - -0.2 3,962,158 - +0.3 3,962,158 - -0.7 3,962,158 - +2.0 3,962,158 - +0.3 3,962,185 + +0.7 3,962,186 - +0.6 3,962,186 - +1.3 3,962,229 - -0.9 3,962,229 - -0.0 3,962,229 - +0.7 3,962,229 - -1.0 3,962,300 + -0.4 3,962,301 - +0.6 3,962,301 - +1.3 3,962,301 - -0.2 3,962,301 - +0.7 3,962,301 - +0.8 3,962,365 - Pf6N2E2_3416 0.13 +1.3 3,962,365 - Pf6N2E2_3416 0.13 -0.7 3,962,365 - Pf6N2E2_3416 0.13 +0.5 3,962,365 - Pf6N2E2_3416 0.13 +0.3 3,962,389 + Pf6N2E2_3416 0.15 -0.2 3,962,390 - Pf6N2E2_3416 0.15 +0.8 3,962,390 - Pf6N2E2_3416 0.15 -0.0 3,962,390 - Pf6N2E2_3416 0.15 +1.5 3,962,464 + Pf6N2E2_3416 0.24 +0.3 3,962,535 + Pf6N2E2_3416 0.31 +1.8 3,962,550 - Pf6N2E2_3416 0.33 +0.1 3,962,550 - Pf6N2E2_3416 0.33 -0.6 3,962,550 - Pf6N2E2_3416 0.33 +0.2 3,962,692 + Pf6N2E2_3416 0.49 +0.4 3,962,693 - Pf6N2E2_3416 0.49 +0.4 3,962,693 - Pf6N2E2_3416 0.49 +0.5 3,962,767 - Pf6N2E2_3416 0.57 +0.7 3,962,781 - Pf6N2E2_3416 0.59 -1.2 3,962,821 - Pf6N2E2_3416 0.63 -1.1 3,962,821 - Pf6N2E2_3416 0.63 +0.7 3,962,821 - Pf6N2E2_3416 0.63 +2.6 3,962,840 + Pf6N2E2_3416 0.65 +0.1 3,962,840 + Pf6N2E2_3416 0.65 +0.2 3,962,840 + Pf6N2E2_3416 0.65 +0.6 3,962,840 + Pf6N2E2_3416 0.65 +0.6 3,962,840 + Pf6N2E2_3416 0.65 -0.3 3,962,840 + Pf6N2E2_3416 0.65 -0.1 3,962,840 + Pf6N2E2_3416 0.65 +0.3 3,962,840 + Pf6N2E2_3416 0.65 -0.9 3,962,841 - Pf6N2E2_3416 0.65 -0.2 3,962,841 - Pf6N2E2_3416 0.65 -0.9 3,962,841 - Pf6N2E2_3416 0.65 +0.6 3,962,841 - Pf6N2E2_3416 0.65 -0.1 3,962,841 - Pf6N2E2_3416 0.65 +1.3 3,962,841 - Pf6N2E2_3416 0.65 +1.4 3,962,841 - Pf6N2E2_3416 0.65 +1.5 3,962,841 - Pf6N2E2_3416 0.65 -0.3 3,962,841 - Pf6N2E2_3416 0.65 +0.2 3,962,841 - Pf6N2E2_3416 0.65 +0.2 3,962,841 - Pf6N2E2_3416 0.65 +1.1 3,962,841 - Pf6N2E2_3416 0.65 +0.5 3,962,841 - Pf6N2E2_3416 0.65 +2.2 3,962,841 - Pf6N2E2_3416 0.65 +0.5 3,962,842 + Pf6N2E2_3416 0.66 +0.6 3,962,842 + Pf6N2E2_3416 0.66 +0.3 3,962,843 - Pf6N2E2_3416 0.66 +0.2 3,962,843 - Pf6N2E2_3416 0.66 +0.1 3,962,873 + Pf6N2E2_3416 0.69 +0.6 3,962,992 + Pf6N2E2_3416 0.82 +1.1 3,962,992 + Pf6N2E2_3416 0.82 +0.3 3,962,992 + Pf6N2E2_3416 0.82 -0.2 3,962,993 - Pf6N2E2_3416 0.82 +1.1 3,962,993 - Pf6N2E2_3416 0.82 -0.5 3,962,993 - Pf6N2E2_3416 0.82 +1.0 3,963,014 + Pf6N2E2_3416 0.85 -0.5 3,963,014 + Pf6N2E2_3416 0.85 +0.0 3,963,015 - Pf6N2E2_3416 0.85 -1.4 3,963,015 - Pf6N2E2_3416 0.85 -1.0 3,963,015 - Pf6N2E2_3416 0.85 -0.2 3,963,015 - Pf6N2E2_3416 0.85 -0.3 3,963,015 - Pf6N2E2_3416 0.85 +0.6 3,963,160 - +1.2 3,963,163 + +0.0 3,963,163 + +0.9 3,963,163 + +0.3 3,963,163 + -0.2 3,963,164 - +0.6 3,963,164 - -0.5 3,963,183 + -1.1 3,963,184 - +0.3 3,963,186 - +0.5 3,963,346 - +0.3 3,963,346 - +1.3 3,963,349 + -0.7 3,963,352 - -0.4 3,963,352 - +1.3 3,963,352 - -0.9 3,963,410 - +1.0 3,963,419 + -0.1 3,963,420 - -0.2 3,963,420 - -0.1 3,963,420 - +0.3 3,963,423 + -0.8 3,963,424 - +0.1 3,963,424 - +2.3 3,963,443 + +0.7 3,963,444 - -0.0 3,963,477 - -0.2 3,963,477 - +0.8 3,963,477 - +0.6 3,963,477 - -0.7 3,963,511 + +0.5 3,963,539 - -0.7 3,963,548 + -0.3 3,963,549 - -0.6 3,963,620 + +1.2 3,963,620 + +0.4 3,963,620 + +0.9 3,963,621 - -0.1 3,963,621 - -0.4 3,963,621 - +0.4 3,963,621 - +0.2 3,963,621 - +0.9 3,963,621 - -0.5 3,963,667 - -0.7 3,963,716 + +0.1 3,963,717 - -1.0 3,963,793 + +0.9 3,963,793 + +0.3 3,963,793 + +0.8 3,963,793 + -0.3 3,963,794 - +2.1 3,963,794 - -0.6 3,963,794 - +1.7 3,963,794 - +0.3 3,963,794 - -0.2 3,963,794 - +1.2 3,963,867 + +0.9 3,963,868 - -0.2 3,963,868 - +1.2 3,963,868 - +0.2 3,963,868 - +0.6 3,963,913 + +1.7 3,963,913 + +1.8 3,963,913 + -2.4 3,963,913 + +0.0 3,963,914 - -0.2 3,963,914 - +0.1 3,963,915 + +1.2 3,963,915 + -0.2 3,963,946 + +3.3 3,963,947 - -0.7 3,963,947 - -1.5 3,963,947 - +0.8 3,963,947 - +0.3 3,963,947 - -0.4 3,963,947 - -0.1 3,963,952 + +0.9 3,963,953 - -0.8 3,964,032 - -0.5 3,964,032 - +1.1 3,964,032 - +1.7 3,964,032 - +0.7 3,964,050 + +0.3 3,964,069 + +0.8 3,964,070 - +1.0 3,964,124 + -0.0 3,964,125 - -0.2
Or see this region's nucleotide sequence