Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g86

Experiment: m.b. Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g85 and HP15_p187g86 are separated by 180 nucleotidesHP15_p187g86 and HP15_p187g87 are separated by 6 nucleotides HP15_p187g85: HP15_p187g85 - conserved hypothetical protein, membrane, at 82,765 to 83,841 _p187g85 HP15_p187g86: HP15_p187g86 - hypothetical protein, at 84,022 to 84,147 _p187g86 HP15_p187g87: HP15_p187g87 - signal transduction histidine kinase, at 84,154 to 85,413 _p187g87 Position (kb) 84 85Strain fitness (log2 ratio) -2 -1 0 1at 83.052 kb on - strand, within HP15_p187g85at 83.067 kb on - strand, within HP15_p187g85at 83.072 kb on - strand, within HP15_p187g85at 83.111 kb on + strand, within HP15_p187g85at 83.116 kb on + strand, within HP15_p187g85at 83.117 kb on + strand, within HP15_p187g85at 83.119 kb on - strand, within HP15_p187g85at 83.124 kb on + strand, within HP15_p187g85at 83.124 kb on + strand, within HP15_p187g85at 83.138 kb on + strand, within HP15_p187g85at 83.231 kb on + strand, within HP15_p187g85at 83.241 kb on - strand, within HP15_p187g85at 83.273 kb on - strand, within HP15_p187g85at 83.276 kb on + strand, within HP15_p187g85at 83.291 kb on + strand, within HP15_p187g85at 83.307 kb on + strand, within HP15_p187g85at 83.319 kb on + strand, within HP15_p187g85at 83.325 kb on - strand, within HP15_p187g85at 83.327 kb on - strand, within HP15_p187g85at 83.327 kb on - strand, within HP15_p187g85at 83.334 kb on + strand, within HP15_p187g85at 83.334 kb on + strand, within HP15_p187g85at 83.334 kb on + strand, within HP15_p187g85at 83.334 kb on + strand, within HP15_p187g85at 83.334 kb on + strand, within HP15_p187g85at 83.337 kb on - strand, within HP15_p187g85at 83.339 kb on + strand, within HP15_p187g85at 83.342 kb on - strand, within HP15_p187g85at 83.342 kb on - strand, within HP15_p187g85at 83.342 kb on - strand, within HP15_p187g85at 83.349 kb on + strand, within HP15_p187g85at 83.355 kb on - strand, within HP15_p187g85at 83.356 kb on - strand, within HP15_p187g85at 83.373 kb on + strand, within HP15_p187g85at 83.373 kb on + strand, within HP15_p187g85at 83.373 kb on + strand, within HP15_p187g85at 83.373 kb on - strand, within HP15_p187g85at 83.381 kb on - strand, within HP15_p187g85at 83.384 kb on + strand, within HP15_p187g85at 83.392 kb on - strand, within HP15_p187g85at 83.392 kb on - strand, within HP15_p187g85at 83.404 kb on - strand, within HP15_p187g85at 83.434 kb on + strand, within HP15_p187g85at 83.446 kb on + strand, within HP15_p187g85at 83.474 kb on - strand, within HP15_p187g85at 83.513 kb on + strand, within HP15_p187g85at 83.513 kb on + strand, within HP15_p187g85at 83.545 kb on + strand, within HP15_p187g85at 83.674 kb on + strand, within HP15_p187g85at 83.682 kb on - strand, within HP15_p187g85at 83.682 kb on - strand, within HP15_p187g85at 83.747 kb on + strandat 83.750 kb on - strandat 83.755 kb on - strandat 83.755 kb on - strandat 83.822 kb on + strandat 83.828 kb on + strandat 83.870 kb on - strandat 83.894 kb on + strandat 83.901 kb on + strandat 83.901 kb on + strandat 83.906 kb on + strandat 83.909 kb on - strandat 83.909 kb on - strandat 83.942 kb on + strandat 83.980 kb on + strandat 83.988 kb on - strandat 84.064 kb on + strand, within HP15_p187g86at 84.100 kb on - strand, within HP15_p187g86at 84.119 kb on + strand, within HP15_p187g86at 84.119 kb on + strand, within HP15_p187g86at 84.119 kb on + strand, within HP15_p187g86at 84.119 kb on + strand, within HP15_p187g86at 84.121 kb on + strand, within HP15_p187g86at 84.124 kb on + strand, within HP15_p187g86at 84.126 kb on + strand, within HP15_p187g86at 84.126 kb on + strand, within HP15_p187g86at 84.126 kb on + strand, within HP15_p187g86at 84.127 kb on - strand, within HP15_p187g86at 84.127 kb on - strand, within HP15_p187g86at 84.127 kb on - strand, within HP15_p187g86at 84.127 kb on - strand, within HP15_p187g86at 84.127 kb on - strand, within HP15_p187g86at 84.134 kb on - strand, within HP15_p187g86at 84.145 kb on + strandat 84.185 kb on - strandat 84.221 kb on + strandat 84.221 kb on + strandat 84.227 kb on + strandat 84.235 kb on - strandat 84.235 kb on - strandat 84.237 kb on + strandat 84.246 kb on + strandat 84.315 kb on + strand, within HP15_p187g87at 84.321 kb on + strand, within HP15_p187g87at 84.321 kb on + strand, within HP15_p187g87at 84.321 kb on + strand, within HP15_p187g87at 84.321 kb on + strand, within HP15_p187g87at 84.329 kb on - strand, within HP15_p187g87at 84.395 kb on + strand, within HP15_p187g87at 84.405 kb on + strand, within HP15_p187g87at 84.408 kb on - strand, within HP15_p187g87at 84.408 kb on - strand, within HP15_p187g87at 84.439 kb on - strand, within HP15_p187g87at 84.496 kb on + strand, within HP15_p187g87at 84.521 kb on - strand, within HP15_p187g87at 84.587 kb on + strand, within HP15_p187g87at 84.640 kb on + strand, within HP15_p187g87at 84.697 kb on + strand, within HP15_p187g87at 84.718 kb on - strand, within HP15_p187g87at 84.781 kb on - strand, within HP15_p187g87at 84.804 kb on - strand, within HP15_p187g87at 84.817 kb on - strand, within HP15_p187g87at 84.829 kb on + strand, within HP15_p187g87at 84.843 kb on + strand, within HP15_p187g87at 84.871 kb on + strand, within HP15_p187g87at 84.871 kb on + strand, within HP15_p187g87at 84.880 kb on - strand, within HP15_p187g87at 84.919 kb on - strand, within HP15_p187g87at 84.950 kb on - strand, within HP15_p187g87at 84.972 kb on + strand, within HP15_p187g87at 84.990 kb on - strand, within HP15_p187g87at 84.990 kb on - strand, within HP15_p187g87at 84.990 kb on - strand, within HP15_p187g87at 85.027 kb on + strand, within HP15_p187g87at 85.029 kb on - strand, within HP15_p187g87at 85.126 kb on + strand, within HP15_p187g87at 85.126 kb on + strand, within HP15_p187g87at 85.126 kb on + strand, within HP15_p187g87at 85.126 kb on + strand, within HP15_p187g87at 85.134 kb on - strand, within HP15_p187g87at 85.134 kb on - strand, within HP15_p187g87at 85.134 kb on - strand, within HP15_p187g87at 85.134 kb on - strand, within HP15_p187g87

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol%
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83,052 - HP15_p187g85 0.27 -0.2
83,067 - HP15_p187g85 0.28 +1.4
83,072 - HP15_p187g85 0.29 +0.3
83,111 + HP15_p187g85 0.32 +0.4
83,116 + HP15_p187g85 0.33 +0.1
83,117 + HP15_p187g85 0.33 +0.9
83,119 - HP15_p187g85 0.33 +0.8
83,124 + HP15_p187g85 0.33 +0.7
83,124 + HP15_p187g85 0.33 +0.1
83,138 + HP15_p187g85 0.35 -0.2
83,231 + HP15_p187g85 0.43 -1.8
83,241 - HP15_p187g85 0.44 +0.7
83,273 - HP15_p187g85 0.47 -0.9
83,276 + HP15_p187g85 0.47 -0.2
83,291 + HP15_p187g85 0.49 +0.2
83,307 + HP15_p187g85 0.50 +1.1
83,319 + HP15_p187g85 0.51 +0.6
83,325 - HP15_p187g85 0.52 -0.4
83,327 - HP15_p187g85 0.52 -0.3
83,327 - HP15_p187g85 0.52 -0.0
83,334 + HP15_p187g85 0.53 -1.9
83,334 + HP15_p187g85 0.53 +0.9
83,334 + HP15_p187g85 0.53 -0.2
83,334 + HP15_p187g85 0.53 +0.5
83,334 + HP15_p187g85 0.53 +0.9
83,337 - HP15_p187g85 0.53 +0.6
83,339 + HP15_p187g85 0.53 +0.2
83,342 - HP15_p187g85 0.54 +0.1
83,342 - HP15_p187g85 0.54 -0.2
83,342 - HP15_p187g85 0.54 -0.6
83,349 + HP15_p187g85 0.54 +0.4
83,355 - HP15_p187g85 0.55 +0.6
83,356 - HP15_p187g85 0.55 +1.1
83,373 + HP15_p187g85 0.56 -0.7
83,373 + HP15_p187g85 0.56 +0.0
83,373 + HP15_p187g85 0.56 +1.0
83,373 - HP15_p187g85 0.56 +0.2
83,381 - HP15_p187g85 0.57 +0.3
83,384 + HP15_p187g85 0.57 -0.3
83,392 - HP15_p187g85 0.58 +0.1
83,392 - HP15_p187g85 0.58 +0.0
83,404 - HP15_p187g85 0.59 -1.1
83,434 + HP15_p187g85 0.62 +0.1
83,446 + HP15_p187g85 0.63 -0.4
83,474 - HP15_p187g85 0.66 -0.2
83,513 + HP15_p187g85 0.69 +0.2
83,513 + HP15_p187g85 0.69 +0.7
83,545 + HP15_p187g85 0.72 +0.1
83,674 + HP15_p187g85 0.84 +0.4
83,682 - HP15_p187g85 0.85 +0.0
83,682 - HP15_p187g85 0.85 +0.1
83,747 + -0.1
83,750 - -0.1
83,755 - +0.1
83,755 - +0.1
83,822 + -0.3
83,828 + +0.5
83,870 - +0.9
83,894 + +0.1
83,901 + +0.3
83,901 + -0.3
83,906 + -0.1
83,909 - -0.6
83,909 - -0.5
83,942 + +0.1
83,980 + +1.4
83,988 - -0.4
84,064 + HP15_p187g86 0.33 -0.7
84,100 - HP15_p187g86 0.62 -0.2
84,119 + HP15_p187g86 0.77 +0.3
84,119 + HP15_p187g86 0.77 +0.6
84,119 + HP15_p187g86 0.77 +0.9
84,119 + HP15_p187g86 0.77 +0.6
84,121 + HP15_p187g86 0.79 +0.8
84,124 + HP15_p187g86 0.81 -0.1
84,126 + HP15_p187g86 0.83 +0.3
84,126 + HP15_p187g86 0.83 +0.5
84,126 + HP15_p187g86 0.83 +0.2
84,127 - HP15_p187g86 0.83 +0.3
84,127 - HP15_p187g86 0.83 +0.3
84,127 - HP15_p187g86 0.83 +0.1
84,127 - HP15_p187g86 0.83 +0.8
84,127 - HP15_p187g86 0.83 +0.6
84,134 - HP15_p187g86 0.89 -0.1
84,145 + -0.6
84,185 - -0.2
84,221 + +0.3
84,221 + +0.3
84,227 + -0.2
84,235 - +0.1
84,235 - -0.9
84,237 + -0.4
84,246 + +0.2
84,315 + HP15_p187g87 0.13 +0.9
84,321 + HP15_p187g87 0.13 +0.1
84,321 + HP15_p187g87 0.13 +0.3
84,321 + HP15_p187g87 0.13 -0.2
84,321 + HP15_p187g87 0.13 +0.3
84,329 - HP15_p187g87 0.14 +0.8
84,395 + HP15_p187g87 0.19 +0.6
84,405 + HP15_p187g87 0.20 -0.2
84,408 - HP15_p187g87 0.20 +0.3
84,408 - HP15_p187g87 0.20 +1.0
84,439 - HP15_p187g87 0.23 +0.2
84,496 + HP15_p187g87 0.27 +0.1
84,521 - HP15_p187g87 0.29 +0.7
84,587 + HP15_p187g87 0.34 +1.0
84,640 + HP15_p187g87 0.39 -0.2
84,697 + HP15_p187g87 0.43 +0.5
84,718 - HP15_p187g87 0.45 +0.4
84,781 - HP15_p187g87 0.50 +0.5
84,804 - HP15_p187g87 0.52 +0.2
84,817 - HP15_p187g87 0.53 +1.1
84,829 + HP15_p187g87 0.54 -2.6
84,843 + HP15_p187g87 0.55 +0.5
84,871 + HP15_p187g87 0.57 -0.7
84,871 + HP15_p187g87 0.57 +0.4
84,880 - HP15_p187g87 0.58 +1.7
84,919 - HP15_p187g87 0.61 +1.1
84,950 - HP15_p187g87 0.63 -0.5
84,972 + HP15_p187g87 0.65 +0.1
84,990 - HP15_p187g87 0.66 -0.5
84,990 - HP15_p187g87 0.66 -0.1
84,990 - HP15_p187g87 0.66 +0.1
85,027 + HP15_p187g87 0.69 +0.1
85,029 - HP15_p187g87 0.69 +0.4
85,126 + HP15_p187g87 0.77 +0.7
85,126 + HP15_p187g87 0.77 +1.7
85,126 + HP15_p187g87 0.77 -0.3
85,126 + HP15_p187g87 0.77 +0.1
85,134 - HP15_p187g87 0.78 +1.7
85,134 - HP15_p187g87 0.78 +1.3
85,134 - HP15_p187g87 0.78 +0.5
85,134 - HP15_p187g87 0.78 +0.3

Or see this region's nucleotide sequence