Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3831 and HP15_3832 are separated by 87 nucleotides HP15_3832 and HP15_3833 are separated by 25 nucleotides HP15_3833 and HP15_3834 are separated by 151 nucleotides
HP15_3831: HP15_3831 - transcriptional regulator, TetR family protein, at 4,058,380 to 4,058,985
_3831
HP15_3832: HP15_3832 - hypothetical protein, at 4,059,073 to 4,059,657
_3832
HP15_3833: HP15_3833 - nitrous-oxide reductase transcriptional activator NosR, at 4,059,683 to 4,061,749
_3833
HP15_3834: HP15_3834 - glutathione S-transferase YghU, at 4,061,901 to 4,062,773
_3834
Position (kb)
4059
4060
4061
4062 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4058.736 kb on - strand, within HP15_3831 at 4058.759 kb on + strand, within HP15_3831 at 4058.788 kb on + strand, within HP15_3831 at 4058.793 kb on + strand, within HP15_3831 at 4058.892 kb on + strand, within HP15_3831 at 4059.155 kb on - strand, within HP15_3832 at 4059.270 kb on - strand, within HP15_3832 at 4059.275 kb on + strand, within HP15_3832 at 4059.658 kb on + strand at 4059.886 kb on + strand at 4059.887 kb on - strand at 4059.894 kb on - strand, within HP15_3833 at 4059.894 kb on - strand, within HP15_3833 at 4060.299 kb on - strand, within HP15_3833 at 4060.315 kb on + strand, within HP15_3833 at 4060.323 kb on - strand, within HP15_3833 at 4060.381 kb on + strand, within HP15_3833 at 4060.383 kb on + strand, within HP15_3833 at 4060.391 kb on - strand, within HP15_3833 at 4060.391 kb on - strand, within HP15_3833 at 4060.438 kb on + strand, within HP15_3833 at 4060.594 kb on + strand, within HP15_3833 at 4060.602 kb on - strand, within HP15_3833 at 4060.650 kb on - strand, within HP15_3833 at 4060.708 kb on + strand, within HP15_3833 at 4060.716 kb on - strand, within HP15_3833 at 4060.716 kb on - strand, within HP15_3833 at 4060.716 kb on - strand, within HP15_3833 at 4060.745 kb on + strand, within HP15_3833 at 4060.772 kb on + strand, within HP15_3833 at 4060.785 kb on - strand, within HP15_3833 at 4060.837 kb on + strand, within HP15_3833 at 4060.845 kb on - strand, within HP15_3833 at 4060.879 kb on + strand, within HP15_3833 at 4060.887 kb on - strand, within HP15_3833 at 4060.927 kb on + strand, within HP15_3833 at 4060.932 kb on - strand, within HP15_3833 at 4060.946 kb on - strand, within HP15_3833 at 4061.085 kb on + strand, within HP15_3833 at 4061.103 kb on - strand, within HP15_3833 at 4061.130 kb on + strand, within HP15_3833 at 4061.185 kb on + strand, within HP15_3833 at 4061.257 kb on - strand, within HP15_3833 at 4061.291 kb on - strand, within HP15_3833 at 4061.291 kb on - strand, within HP15_3833 at 4061.345 kb on + strand, within HP15_3833 at 4061.394 kb on - strand, within HP15_3833 at 4061.394 kb on - strand, within HP15_3833 at 4061.405 kb on + strand, within HP15_3833 at 4061.428 kb on - strand, within HP15_3833 at 4061.478 kb on - strand, within HP15_3833 at 4061.485 kb on - strand, within HP15_3833 at 4061.501 kb on - strand, within HP15_3833 at 4061.736 kb on - strand at 4061.741 kb on - strand at 4061.763 kb on + strand at 4061.787 kb on + strand at 4061.793 kb on + strand at 4061.795 kb on - strand at 4061.801 kb on - strand at 4061.997 kb on + strand, within HP15_3834 at 4062.046 kb on - strand, within HP15_3834 at 4062.046 kb on - strand, within HP15_3834 at 4062.155 kb on - strand, within HP15_3834 at 4062.172 kb on + strand, within HP15_3834 at 4062.190 kb on - strand, within HP15_3834 at 4062.231 kb on - strand, within HP15_3834 at 4062.266 kb on + strand, within HP15_3834 at 4062.274 kb on - strand, within HP15_3834 at 4062.403 kb on + strand, within HP15_3834 at 4062.405 kb on + strand, within HP15_3834 at 4062.466 kb on - strand, within HP15_3834 at 4062.480 kb on - strand, within HP15_3834 at 4062.483 kb on + strand, within HP15_3834 at 4062.610 kb on - strand, within HP15_3834 at 4062.633 kb on - strand, within HP15_3834 at 4062.666 kb on - strand, within HP15_3834 at 4062.680 kb on + strand, within HP15_3834 at 4062.680 kb on + strand, within HP15_3834 at 4062.680 kb on + strand, within HP15_3834 at 4062.680 kb on + strand, within HP15_3834 at 4062.688 kb on - strand at 4062.688 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 4,058,736 - HP15_3831 0.59 +0.6 4,058,759 + HP15_3831 0.63 +0.4 4,058,788 + HP15_3831 0.67 +0.7 4,058,793 + HP15_3831 0.68 +1.0 4,058,892 + HP15_3831 0.84 -1.2 4,059,155 - HP15_3832 0.14 +0.1 4,059,270 - HP15_3832 0.34 -0.3 4,059,275 + HP15_3832 0.35 +1.0 4,059,658 + +1.2 4,059,886 + +0.5 4,059,887 - -0.0 4,059,894 - HP15_3833 0.10 -0.3 4,059,894 - HP15_3833 0.10 -0.2 4,060,299 - HP15_3833 0.30 -0.5 4,060,315 + HP15_3833 0.31 -0.1 4,060,323 - HP15_3833 0.31 +0.4 4,060,381 + HP15_3833 0.34 +1.1 4,060,383 + HP15_3833 0.34 -0.4 4,060,391 - HP15_3833 0.34 -0.1 4,060,391 - HP15_3833 0.34 -0.2 4,060,438 + HP15_3833 0.37 +1.4 4,060,594 + HP15_3833 0.44 +0.8 4,060,602 - HP15_3833 0.44 +0.1 4,060,650 - HP15_3833 0.47 +0.4 4,060,708 + HP15_3833 0.50 +0.3 4,060,716 - HP15_3833 0.50 +0.5 4,060,716 - HP15_3833 0.50 +0.2 4,060,716 - HP15_3833 0.50 +0.0 4,060,745 + HP15_3833 0.51 +2.6 4,060,772 + HP15_3833 0.53 +0.2 4,060,785 - HP15_3833 0.53 -0.3 4,060,837 + HP15_3833 0.56 +0.8 4,060,845 - HP15_3833 0.56 -0.4 4,060,879 + HP15_3833 0.58 +0.3 4,060,887 - HP15_3833 0.58 -0.0 4,060,927 + HP15_3833 0.60 +0.2 4,060,932 - HP15_3833 0.60 +0.5 4,060,946 - HP15_3833 0.61 -0.9 4,061,085 + HP15_3833 0.68 +0.6 4,061,103 - HP15_3833 0.69 +0.2 4,061,130 + HP15_3833 0.70 -0.0 4,061,185 + HP15_3833 0.73 +0.1 4,061,257 - HP15_3833 0.76 -0.6 4,061,291 - HP15_3833 0.78 -0.3 4,061,291 - HP15_3833 0.78 -1.3 4,061,345 + HP15_3833 0.80 +0.7 4,061,394 - HP15_3833 0.83 +0.7 4,061,394 - HP15_3833 0.83 +2.3 4,061,405 + HP15_3833 0.83 +1.7 4,061,428 - HP15_3833 0.84 +0.2 4,061,478 - HP15_3833 0.87 -0.3 4,061,485 - HP15_3833 0.87 +0.4 4,061,501 - HP15_3833 0.88 -0.2 4,061,736 - -0.5 4,061,741 - -0.1 4,061,763 + +0.3 4,061,787 + +1.4 4,061,793 + +0.2 4,061,795 - -0.0 4,061,801 - +0.6 4,061,997 + HP15_3834 0.11 -0.7 4,062,046 - HP15_3834 0.17 +1.3 4,062,046 - HP15_3834 0.17 -0.6 4,062,155 - HP15_3834 0.29 -0.7 4,062,172 + HP15_3834 0.31 -1.0 4,062,190 - HP15_3834 0.33 +1.0 4,062,231 - HP15_3834 0.38 -0.6 4,062,266 + HP15_3834 0.42 -1.8 4,062,274 - HP15_3834 0.43 -0.4 4,062,403 + HP15_3834 0.58 -1.6 4,062,405 + HP15_3834 0.58 -2.0 4,062,466 - HP15_3834 0.65 -0.3 4,062,480 - HP15_3834 0.66 -0.6 4,062,483 + HP15_3834 0.67 -0.9 4,062,610 - HP15_3834 0.81 -0.5 4,062,633 - HP15_3834 0.84 -0.8 4,062,666 - HP15_3834 0.88 -0.3 4,062,680 + HP15_3834 0.89 -0.3 4,062,680 + HP15_3834 0.89 -0.0 4,062,680 + HP15_3834 0.89 -0.9 4,062,680 + HP15_3834 0.89 -0.9 4,062,688 - -0.6 4,062,688 - -0.8
Or see this region's nucleotide sequence