Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1615 and HP15_1616 are separated by 130 nucleotides HP15_1616 and HP15_1618 are separated by 14 nucleotides HP15_1618 and HP15_1617 are separated by 138 nucleotides HP15_1617 and HP15_1619 overlap by 28 nucleotides
HP15_1615: HP15_1615 - TonB-dependent receptor, plug, at 1,711,756 to 1,713,906
_1615
HP15_1616: HP15_1616 - protein containing DnaJ domain, at 1,714,037 to 1,714,681
_1616
HP15_1618: HP15_1618 - uncharacterized conserved protein UCP026166, sodium bile acid symporter, at 1,714,696 to 1,715,451
_1618
HP15_1617: HP15_1617 - hypothetical protein, at 1,715,590 to 1,715,721
_1617
HP15_1619: HP15_1619 - GntR domain protein, at 1,715,694 to 1,716,371
_1619
Position (kb)
1714
1715
1716 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1713.843 kb on + strand at 1713.861 kb on - strand at 1713.945 kb on - strand at 1714.004 kb on - strand at 1714.062 kb on - strand at 1714.067 kb on - strand at 1714.210 kb on + strand, within HP15_1616 at 1714.219 kb on - strand, within HP15_1616 at 1714.243 kb on - strand, within HP15_1616 at 1714.306 kb on + strand, within HP15_1616 at 1714.306 kb on + strand, within HP15_1616 at 1714.314 kb on - strand, within HP15_1616 at 1714.354 kb on + strand, within HP15_1616 at 1714.517 kb on - strand, within HP15_1616 at 1714.529 kb on - strand, within HP15_1616 at 1714.663 kb on - strand at 1714.677 kb on + strand at 1714.720 kb on - strand at 1714.749 kb on - strand at 1714.765 kb on - strand at 1714.882 kb on + strand, within HP15_1618 at 1714.980 kb on + strand, within HP15_1618 at 1715.325 kb on + strand, within HP15_1618 at 1715.358 kb on - strand, within HP15_1618 at 1715.416 kb on - strand at 1715.518 kb on + strand at 1715.535 kb on + strand at 1715.600 kb on - strand at 1715.663 kb on + strand, within HP15_1617 at 1715.671 kb on - strand, within HP15_1617 at 1715.700 kb on - strand at 1715.927 kb on + strand, within HP15_1619 at 1715.969 kb on + strand, within HP15_1619 at 1716.133 kb on - strand, within HP15_1619 at 1716.246 kb on - strand, within HP15_1619 at 1716.291 kb on + strand, within HP15_1619
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 1,713,843 + +0.0 1,713,861 - -0.3 1,713,945 - +0.7 1,714,004 - -1.2 1,714,062 - +0.2 1,714,067 - -0.8 1,714,210 + HP15_1616 0.27 -0.2 1,714,219 - HP15_1616 0.28 -0.5 1,714,243 - HP15_1616 0.32 -0.1 1,714,306 + HP15_1616 0.42 +0.3 1,714,306 + HP15_1616 0.42 -0.3 1,714,314 - HP15_1616 0.43 -0.6 1,714,354 + HP15_1616 0.49 -0.3 1,714,517 - HP15_1616 0.74 +0.2 1,714,529 - HP15_1616 0.76 -1.5 1,714,663 - -0.1 1,714,677 + +0.7 1,714,720 - -0.5 1,714,749 - -2.3 1,714,765 - -0.0 1,714,882 + HP15_1618 0.25 -1.1 1,714,980 + HP15_1618 0.38 -1.3 1,715,325 + HP15_1618 0.83 -2.9 1,715,358 - HP15_1618 0.88 -0.8 1,715,416 - -1.3 1,715,518 + -1.3 1,715,535 + -0.6 1,715,600 - -0.8 1,715,663 + HP15_1617 0.55 -3.0 1,715,671 - HP15_1617 0.61 -0.4 1,715,700 - -1.1 1,715,927 + HP15_1619 0.34 -1.3 1,715,969 + HP15_1619 0.41 -2.1 1,716,133 - HP15_1619 0.65 -1.2 1,716,246 - HP15_1619 0.81 -0.6 1,716,291 + HP15_1619 0.88 -0.8
Or see this region's nucleotide sequence