Experiment: Pyruvate-Sulfite (60-20mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0637 and DVU0638 are separated by 132 nucleotides DVU0638 and tRNA-Glu are separated by 488 nucleotides tRNA-Glu and pomB are separated by 217 nucleotides
DVU0637: DVU0637 - conserved hypothetical protein (TIGR), at 706,392 to 707,780
DVU0637
DVU0638: DVU0638 - membrane protein, putative (TIGR), at 707,913 to 708,779
DVU0638
DVU_tRNA-Glu-2: tRNA-Glu - tRNA with anticodon TTC for Glu (VIMSS-AUTO), at 709,268 to 709,344
tRNA-Glu
DVU0639: pomB - chemotaxis protein PomB (TIGR), at 709,562 to 710,335
pomB
Position (kb) 707
708
709 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 706.927 kb on - strand, within DVU0637 at 706.935 kb on - strand, within DVU0637 at 706.961 kb on + strand, within DVU0637 at 706.967 kb on + strand, within DVU0637 at 707.141 kb on - strand, within DVU0637 at 707.175 kb on + strand, within DVU0637 at 707.188 kb on - strand, within DVU0637 at 707.303 kb on + strand, within DVU0637 at 707.311 kb on - strand, within DVU0637 at 707.363 kb on - strand, within DVU0637 at 707.488 kb on - strand, within DVU0637 at 707.558 kb on + strand, within DVU0637 at 707.608 kb on - strand, within DVU0637 at 707.774 kb on + strand at 707.784 kb on - strand at 707.849 kb on + strand at 707.857 kb on - strand at 707.867 kb on - strand at 707.983 kb on - strand at 707.983 kb on - strand at 708.056 kb on - strand, within DVU0638 at 708.069 kb on - strand, within DVU0638 at 708.099 kb on - strand, within DVU0638 at 708.155 kb on + strand, within DVU0638 at 708.174 kb on - strand, within DVU0638 at 708.238 kb on + strand, within DVU0638 at 708.334 kb on - strand, within DVU0638 at 708.426 kb on + strand, within DVU0638 at 708.449 kb on + strand, within DVU0638 at 708.449 kb on + strand, within DVU0638 at 708.449 kb on + strand, within DVU0638 at 708.449 kb on + strand, within DVU0638 at 708.457 kb on - strand, within DVU0638 at 708.457 kb on - strand, within DVU0638 at 708.457 kb on - strand, within DVU0638 at 708.457 kb on - strand, within DVU0638 at 708.484 kb on + strand, within DVU0638 at 708.492 kb on - strand, within DVU0638 at 708.512 kb on - strand, within DVU0638 at 708.556 kb on - strand, within DVU0638 at 708.742 kb on + strand at 708.924 kb on + strand at 708.934 kb on - strand at 708.951 kb on + strand at 708.959 kb on - strand at 708.987 kb on + strand at 709.001 kb on - strand at 709.131 kb on + strand at 709.133 kb on + strand at 709.141 kb on - strand at 709.141 kb on - strand at 709.141 kb on - strand at 709.141 kb on - strand at 709.144 kb on + strand at 709.166 kb on - strand at 709.441 kb on + strand at 709.442 kb on + strand at 709.453 kb on + strand at 709.560 kb on + strand at 709.708 kb on + strand, within pomB
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Molybdate 100uM remove 706,927 - DVU0637 0.39 +1.2 706,935 - DVU0637 0.39 +0.0 706,961 + DVU0637 0.41 +0.9 706,967 + DVU0637 0.41 -0.7 707,141 - DVU0637 0.54 -0.4 707,175 + DVU0637 0.56 +2.5 707,188 - DVU0637 0.57 +0.4 707,303 + DVU0637 0.66 +0.3 707,311 - DVU0637 0.66 -0.2 707,363 - DVU0637 0.70 -0.7 707,488 - DVU0637 0.79 -0.7 707,558 + DVU0637 0.84 -0.3 707,608 - DVU0637 0.88 +0.2 707,774 + -0.3 707,784 - +0.5 707,849 + -0.0 707,857 - -0.4 707,867 - +0.4 707,983 - +3.5 707,983 - -0.4 708,056 - DVU0638 0.16 -0.2 708,069 - DVU0638 0.18 -0.9 708,099 - DVU0638 0.21 -0.2 708,155 + DVU0638 0.28 +0.5 708,174 - DVU0638 0.30 -0.2 708,238 + DVU0638 0.37 -0.5 708,334 - DVU0638 0.49 -0.5 708,426 + DVU0638 0.59 +0.3 708,449 + DVU0638 0.62 -0.2 708,449 + DVU0638 0.62 -0.1 708,449 + DVU0638 0.62 +3.2 708,449 + DVU0638 0.62 -0.3 708,457 - DVU0638 0.63 -1.7 708,457 - DVU0638 0.63 -0.3 708,457 - DVU0638 0.63 +0.4 708,457 - DVU0638 0.63 -0.1 708,484 + DVU0638 0.66 +0.0 708,492 - DVU0638 0.67 -0.4 708,512 - DVU0638 0.69 -3.3 708,556 - DVU0638 0.74 +0.8 708,742 + -0.3 708,924 + -0.4 708,934 - -0.0 708,951 + -0.4 708,959 - -1.0 708,987 + -0.1 709,001 - +1.8 709,131 + -0.6 709,133 + +0.0 709,141 - -0.4 709,141 - +0.3 709,141 - -1.2 709,141 - +0.2 709,144 + +0.5 709,166 - -0.6 709,441 + -0.4 709,442 + -1.0 709,453 + +0.0 709,560 + -0.4 709,708 + pomB DVU0639 0.19 +0.4
Or see this region's nucleotide sequence