Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0004 and DVUA0005 are separated by 654 nucleotides DVUA0005 and mgtE are separated by 22 nucleotides
DVUA0004: DVUA0004 - DNA-binding protein HU, putative (TIGR), at 5,490 to 5,843
DVUA0004
DVUA0005: DVUA0005 - universal stress protein family (TIGR), at 6,498 to 7,433
DVUA0005
DVUA0006: mgtE - magnesium transporter MgtE, putative (TIGR), at 7,456 to 8,451
mgtE
Position (kb)
6
7
8 Strain fitness (log2 ratio)
-2
-1
0
1 at 5.907 kb on - strand at 5.935 kb on - strand at 5.985 kb on + strand at 6.079 kb on + strand at 6.200 kb on + strand at 6.208 kb on - strand at 6.208 kb on - strand at 6.209 kb on - strand at 6.271 kb on + strand at 6.306 kb on + strand at 6.314 kb on - strand at 6.496 kb on + strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.639 kb on + strand, within DVUA0005 at 6.639 kb on - strand, within DVUA0005 at 6.647 kb on - strand, within DVUA0005 at 6.663 kb on + strand, within DVUA0005 at 6.686 kb on + strand, within DVUA0005 at 6.716 kb on - strand, within DVUA0005 at 6.740 kb on + strand, within DVUA0005 at 6.832 kb on + strand, within DVUA0005 at 6.865 kb on - strand, within DVUA0005 at 6.995 kb on + strand, within DVUA0005 at 7.016 kb on + strand, within DVUA0005 at 7.016 kb on + strand, within DVUA0005 at 7.125 kb on + strand, within DVUA0005 at 7.140 kb on - strand, within DVUA0005 at 7.171 kb on + strand, within DVUA0005 at 7.314 kb on - strand, within DVUA0005 at 7.358 kb on + strand at 7.362 kb on + strand at 7.365 kb on - strand at 7.518 kb on + strand at 7.526 kb on - strand at 7.729 kb on - strand, within mgtE at 7.736 kb on + strand, within mgtE at 7.855 kb on - strand, within mgtE at 8.000 kb on - strand, within mgtE at 8.071 kb on + strand, within mgtE at 8.072 kb on - strand, within mgtE at 8.152 kb on + strand, within mgtE at 8.160 kb on - strand, within mgtE at 8.251 kb on - strand, within mgtE at 8.404 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 5,907 - -0.4 5,935 - -0.3 5,985 + +0.0 6,079 + -0.9 6,200 + -0.0 6,208 - -0.2 6,208 - -2.3 6,209 - -0.6 6,271 + -0.4 6,306 + +0.0 6,314 - +0.1 6,496 + -0.3 6,504 - -0.0 6,504 - -0.1 6,504 - +0.2 6,504 - +0.2 6,504 - -1.1 6,504 - +0.3 6,639 + DVUA0005 0.15 -0.2 6,639 - DVUA0005 0.15 -0.2 6,647 - DVUA0005 0.16 -1.0 6,663 + DVUA0005 0.18 +0.7 6,686 + DVUA0005 0.20 +0.1 6,716 - DVUA0005 0.23 -0.0 6,740 + DVUA0005 0.26 -0.0 6,832 + DVUA0005 0.36 +0.9 6,865 - DVUA0005 0.39 -0.2 6,995 + DVUA0005 0.53 -0.2 7,016 + DVUA0005 0.55 +0.1 7,016 + DVUA0005 0.55 +0.1 7,125 + DVUA0005 0.67 +0.8 7,140 - DVUA0005 0.69 -2.1 7,171 + DVUA0005 0.72 -0.7 7,314 - DVUA0005 0.87 -0.4 7,358 + +0.7 7,362 + -1.1 7,365 - +0.1 7,518 + +0.5 7,526 - -0.8 7,729 - mgtE DVUA0006 0.27 -0.4 7,736 + mgtE DVUA0006 0.28 -0.1 7,855 - mgtE DVUA0006 0.40 -0.5 8,000 - mgtE DVUA0006 0.55 -0.3 8,071 + mgtE DVUA0006 0.62 -0.1 8,072 - mgtE DVUA0006 0.62 -0.1 8,152 + mgtE DVUA0006 0.70 +0.9 8,160 - mgtE DVUA0006 0.71 -0.1 8,251 - mgtE DVUA0006 0.80 -0.5 8,404 - -0.9
Or see this region's nucleotide sequence