Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0641 and DVU0642 are separated by 399 nucleotides DVU0642 and DVU0643 are separated by 84 nucleotides
DVU0641: DVU0641 - conserved hypothetical protein (TIGR), at 711,092 to 712,240
DVU0641
DVU0642: DVU0642 - hydrolase, alpha/beta fold family (TIGR), at 712,640 to 713,452
DVU0642
DVU0643: DVU0643 - thiF protein, putative (TIGR), at 713,537 to 714,376
DVU0643
Position (kb) 712
713
714 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 711.756 kb on + strand, within DVU0641 at 711.997 kb on + strand, within DVU0641 at 712.005 kb on - strand, within DVU0641 at 712.048 kb on - strand, within DVU0641 at 712.120 kb on + strand, within DVU0641 at 712.120 kb on + strand, within DVU0641 at 712.128 kb on - strand at 712.150 kb on + strand at 712.158 kb on - strand at 712.170 kb on + strand at 712.497 kb on - strand at 712.505 kb on + strand at 712.547 kb on + strand at 712.693 kb on + strand at 712.693 kb on + strand at 712.701 kb on - strand at 712.701 kb on - strand at 712.741 kb on + strand, within DVU0642 at 712.749 kb on - strand, within DVU0642 at 712.760 kb on + strand, within DVU0642 at 712.844 kb on + strand, within DVU0642 at 712.982 kb on + strand, within DVU0642 at 713.052 kb on - strand, within DVU0642 at 713.147 kb on - strand, within DVU0642 at 713.207 kb on + strand, within DVU0642 at 713.284 kb on - strand, within DVU0642 at 713.475 kb on + strand at 713.475 kb on + strand at 713.566 kb on + strand at 713.682 kb on - strand, within DVU0643 at 713.682 kb on - strand, within DVU0643 at 713.686 kb on + strand, within DVU0643 at 713.696 kb on + strand, within DVU0643 at 713.701 kb on + strand, within DVU0643 at 713.704 kb on - strand, within DVU0643 at 713.704 kb on - strand, within DVU0643 at 713.763 kb on - strand, within DVU0643 at 713.917 kb on - strand, within DVU0643 at 713.956 kb on + strand, within DVU0643 at 713.968 kb on + strand, within DVU0643 at 713.992 kb on + strand, within DVU0643 at 714.012 kb on + strand, within DVU0643 at 714.079 kb on - strand, within DVU0643 at 714.108 kb on - strand, within DVU0643 at 714.132 kb on - strand, within DVU0643 at 714.157 kb on + strand, within DVU0643 at 714.203 kb on + strand, within DVU0643 at 714.245 kb on + strand, within DVU0643 at 714.251 kb on - strand, within DVU0643 at 714.268 kb on + strand, within DVU0643 at 714.276 kb on - strand, within DVU0643 at 714.365 kb on + strand at 714.365 kb on + strand at 714.368 kb on - strand at 714.404 kb on - strand at 714.417 kb on + strand at 714.441 kb on + strand at 714.441 kb on + strand at 714.441 kb on + strand at 714.449 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 711,756 + DVU0641 0.58 -0.0 711,997 + DVU0641 0.79 +0.3 712,005 - DVU0641 0.79 -3.2 712,048 - DVU0641 0.83 -0.5 712,120 + DVU0641 0.89 +0.1 712,120 + DVU0641 0.89 -0.0 712,128 - -0.1 712,150 + +0.3 712,158 - -0.1 712,170 + -0.1 712,497 - -0.0 712,505 + -0.3 712,547 + +0.2 712,693 + +1.6 712,693 + +0.4 712,701 - +0.4 712,701 - -0.4 712,741 + DVU0642 0.12 +1.5 712,749 - DVU0642 0.13 -1.9 712,760 + DVU0642 0.15 -0.9 712,844 + DVU0642 0.25 -0.4 712,982 + DVU0642 0.42 +0.2 713,052 - DVU0642 0.51 -0.0 713,147 - DVU0642 0.62 -0.3 713,207 + DVU0642 0.70 -0.1 713,284 - DVU0642 0.79 -3.6 713,475 + +0.3 713,475 + +0.2 713,566 + -0.2 713,682 - DVU0643 0.17 -0.5 713,682 - DVU0643 0.17 +1.2 713,686 + DVU0643 0.18 +0.7 713,696 + DVU0643 0.19 -0.8 713,701 + DVU0643 0.20 +0.2 713,704 - DVU0643 0.20 +0.1 713,704 - DVU0643 0.20 -0.3 713,763 - DVU0643 0.27 -0.3 713,917 - DVU0643 0.45 +0.0 713,956 + DVU0643 0.50 -0.0 713,968 + DVU0643 0.51 -0.3 713,992 + DVU0643 0.54 -1.3 714,012 + DVU0643 0.57 -0.3 714,079 - DVU0643 0.65 +0.4 714,108 - DVU0643 0.68 -0.5 714,132 - DVU0643 0.71 +0.0 714,157 + DVU0643 0.74 -1.2 714,203 + DVU0643 0.79 +0.4 714,245 + DVU0643 0.84 -0.1 714,251 - DVU0643 0.85 +0.4 714,268 + DVU0643 0.87 -0.2 714,276 - DVU0643 0.88 -0.1 714,365 + +0.1 714,365 + -0.3 714,368 - -2.0 714,404 - -0.2 714,417 + -2.7 714,441 + +0.0 714,441 + +0.3 714,441 + -0.1 714,449 - +0.3
Or see this region's nucleotide sequence