Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0422 and DVU0423 are separated by 152 nucleotides DVU0423 and cls are separated by 152 nucleotides
DVU0422: DVU0422 - sensory box/GGDEF domain/EAL domain protein (TIGR), at 475,147 to 478,365
DVU0422
DVU0423: DVU0423 - universal stress protein family (TIGR), at 478,518 to 478,943
DVU0423
DVU0424: cls - cardiolipin synthetase (TIGR), at 479,096 to 480,541
cls
Position (kb) 478
479 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 477.536 kb on - strand, within DVU0422 at 477.556 kb on + strand, within DVU0422 at 477.697 kb on + strand, within DVU0422 at 477.779 kb on + strand, within DVU0422 at 477.814 kb on - strand, within DVU0422 at 477.842 kb on - strand, within DVU0422 at 477.842 kb on - strand, within DVU0422 at 477.853 kb on + strand, within DVU0422 at 477.853 kb on + strand, within DVU0422 at 477.872 kb on + strand, within DVU0422 at 477.880 kb on - strand, within DVU0422 at 477.986 kb on + strand, within DVU0422 at 478.026 kb on + strand, within DVU0422 at 478.028 kb on + strand, within DVU0422 at 478.034 kb on - strand, within DVU0422 at 478.044 kb on + strand at 478.077 kb on + strand at 478.089 kb on + strand at 478.091 kb on - strand at 478.094 kb on + strand at 478.160 kb on - strand at 478.208 kb on + strand at 478.208 kb on + strand at 478.208 kb on + strand at 478.216 kb on - strand at 478.297 kb on + strand at 478.395 kb on - strand at 478.429 kb on + strand at 478.437 kb on - strand at 478.437 kb on - strand at 478.437 kb on - strand at 478.459 kb on - strand at 478.507 kb on - strand at 478.509 kb on + strand at 478.517 kb on - strand at 478.591 kb on + strand, within DVU0423 at 478.595 kb on + strand, within DVU0423 at 478.610 kb on - strand, within DVU0423 at 478.615 kb on + strand, within DVU0423 at 478.634 kb on - strand, within DVU0423 at 478.644 kb on - strand, within DVU0423 at 478.648 kb on - strand, within DVU0423 at 478.658 kb on + strand, within DVU0423 at 478.727 kb on + strand, within DVU0423 at 478.752 kb on + strand, within DVU0423 at 478.752 kb on + strand, within DVU0423 at 478.798 kb on - strand, within DVU0423 at 478.878 kb on + strand, within DVU0423 at 478.886 kb on - strand, within DVU0423 at 479.006 kb on + strand at 479.006 kb on + strand at 479.014 kb on - strand at 479.021 kb on + strand at 479.029 kb on - strand at 479.029 kb on - strand at 479.067 kb on + strand at 479.075 kb on - strand at 479.075 kb on - strand at 479.107 kb on + strand at 479.112 kb on + strand at 479.112 kb on + strand at 479.202 kb on + strand at 479.210 kb on - strand at 479.232 kb on - strand at 479.444 kb on - strand, within cls at 479.455 kb on + strand, within cls at 479.455 kb on + strand, within cls at 479.455 kb on + strand, within cls at 479.455 kb on + strand, within cls at 479.463 kb on - strand, within cls at 479.463 kb on - strand, within cls at 479.463 kb on - strand, within cls at 479.463 kb on - strand, within cls at 479.476 kb on + strand, within cls at 479.525 kb on + strand, within cls at 479.525 kb on + strand, within cls at 479.531 kb on - strand, within cls at 479.554 kb on + strand, within cls at 479.692 kb on - strand, within cls at 479.790 kb on + strand, within cls at 479.843 kb on + strand, within cls at 479.870 kb on - strand, within cls at 479.892 kb on - strand, within cls at 479.924 kb on - strand, within cls at 479.929 kb on + strand, within cls
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 477,536 - DVU0422 0.74 +0.2 477,556 + DVU0422 0.75 +0.1 477,697 + DVU0422 0.79 +0.1 477,779 + DVU0422 0.82 +0.0 477,814 - DVU0422 0.83 -0.0 477,842 - DVU0422 0.84 +0.1 477,842 - DVU0422 0.84 -0.3 477,853 + DVU0422 0.84 -0.4 477,853 + DVU0422 0.84 -1.4 477,872 + DVU0422 0.85 -0.0 477,880 - DVU0422 0.85 +0.3 477,986 + DVU0422 0.88 +0.5 478,026 + DVU0422 0.89 +0.1 478,028 + DVU0422 0.89 -0.6 478,034 - DVU0422 0.90 -0.9 478,044 + +0.1 478,077 + -0.0 478,089 + +0.4 478,091 - +0.5 478,094 + -0.0 478,160 - -0.1 478,208 + +0.5 478,208 + +0.1 478,208 + -0.5 478,216 - +0.4 478,297 + -0.7 478,395 - -1.4 478,429 + +0.8 478,437 - +0.5 478,437 - -0.2 478,437 - +0.2 478,459 - +0.8 478,507 - +0.5 478,509 + +0.5 478,517 - +0.4 478,591 + DVU0423 0.17 -0.4 478,595 + DVU0423 0.18 -0.4 478,610 - DVU0423 0.22 -0.9 478,615 + DVU0423 0.23 +0.0 478,634 - DVU0423 0.27 +0.7 478,644 - DVU0423 0.30 +0.1 478,648 - DVU0423 0.31 +0.1 478,658 + DVU0423 0.33 +0.1 478,727 + DVU0423 0.49 -0.6 478,752 + DVU0423 0.55 -0.5 478,752 + DVU0423 0.55 +0.2 478,798 - DVU0423 0.66 -1.4 478,878 + DVU0423 0.85 -0.2 478,886 - DVU0423 0.86 -0.1 479,006 + +0.2 479,006 + -0.5 479,014 - +0.8 479,021 + -1.0 479,029 - -0.1 479,029 - -0.2 479,067 + -1.3 479,075 - -0.2 479,075 - +0.2 479,107 + -1.1 479,112 + -1.0 479,112 + -0.2 479,202 + -0.9 479,210 - -1.1 479,232 - -0.8 479,444 - cls DVU0424 0.24 -0.5 479,455 + cls DVU0424 0.25 -1.6 479,455 + cls DVU0424 0.25 -0.4 479,455 + cls DVU0424 0.25 +0.0 479,455 + cls DVU0424 0.25 -0.1 479,463 - cls DVU0424 0.25 +0.5 479,463 - cls DVU0424 0.25 -0.7 479,463 - cls DVU0424 0.25 -0.2 479,463 - cls DVU0424 0.25 -2.5 479,476 + cls DVU0424 0.26 -0.5 479,525 + cls DVU0424 0.30 -0.8 479,525 + cls DVU0424 0.30 -0.7 479,531 - cls DVU0424 0.30 -4.2 479,554 + cls DVU0424 0.32 -1.4 479,692 - cls DVU0424 0.41 -1.2 479,790 + cls DVU0424 0.48 -0.1 479,843 + cls DVU0424 0.52 -0.4 479,870 - cls DVU0424 0.54 -0.5 479,892 - cls DVU0424 0.55 -0.1 479,924 - cls DVU0424 0.57 -0.7 479,929 + cls DVU0424 0.58 -0.4
Or see this region's nucleotide sequence