Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0277 and DVU0278 are separated by 293 nucleotides DVU0278 and DVU0279 are separated by 324 nucleotides
DVU0277: DVU0277 - transcriptional regulator, AraC family (TIGR), at 320,357 to 321,337
DVU0277
DVU0278: DVU0278 - glyoxalase family protein (TIGR), at 321,631 to 322,053
DVU0278
DVU0279: DVU0279 - sulfate permease family protein (TIGR), at 322,378 to 324,084
DVU0279
Position (kb) 321
322
323 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 320.711 kb on - strand, within DVU0277 at 320.719 kb on + strand, within DVU0277 at 320.722 kb on + strand, within DVU0277 at 320.780 kb on + strand, within DVU0277 at 320.783 kb on - strand, within DVU0277 at 320.900 kb on - strand, within DVU0277 at 320.923 kb on + strand, within DVU0277 at 320.931 kb on - strand, within DVU0277 at 320.959 kb on - strand, within DVU0277 at 320.961 kb on + strand, within DVU0277 at 320.969 kb on - strand, within DVU0277 at 320.979 kb on + strand, within DVU0277 at 321.033 kb on + strand, within DVU0277 at 321.033 kb on + strand, within DVU0277 at 321.056 kb on - strand, within DVU0277 at 321.101 kb on - strand, within DVU0277 at 321.117 kb on - strand, within DVU0277 at 321.135 kb on - strand, within DVU0277 at 321.146 kb on + strand, within DVU0277 at 321.260 kb on - strand at 321.262 kb on + strand at 321.292 kb on - strand at 321.361 kb on + strand at 321.369 kb on + strand at 321.441 kb on + strand at 321.497 kb on - strand at 321.570 kb on + strand at 321.674 kb on - strand, within DVU0278 at 321.767 kb on - strand, within DVU0278 at 321.807 kb on - strand, within DVU0278 at 321.837 kb on + strand, within DVU0278 at 321.837 kb on + strand, within DVU0278 at 321.842 kb on + strand, within DVU0278 at 321.845 kb on - strand, within DVU0278 at 321.907 kb on - strand, within DVU0278 at 321.909 kb on + strand, within DVU0278 at 321.909 kb on + strand, within DVU0278 at 321.915 kb on + strand, within DVU0278 at 321.948 kb on - strand, within DVU0278 at 321.970 kb on + strand, within DVU0278 at 322.011 kb on + strand at 322.059 kb on + strand at 322.067 kb on - strand at 322.067 kb on - strand at 322.074 kb on + strand at 322.082 kb on + strand at 322.107 kb on - strand at 322.138 kb on + strand at 322.146 kb on - strand at 322.323 kb on + strand at 322.351 kb on - strand at 322.435 kb on + strand at 322.447 kb on + strand at 322.666 kb on - strand, within DVU0279 at 322.699 kb on - strand, within DVU0279 at 322.704 kb on - strand, within DVU0279 at 322.718 kb on - strand, within DVU0279 at 322.725 kb on + strand, within DVU0279 at 322.899 kb on - strand, within DVU0279 at 322.900 kb on + strand, within DVU0279 at 323.038 kb on + strand, within DVU0279
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 320,711 - DVU0277 0.36 -0.1 320,719 + DVU0277 0.37 -1.6 320,722 + DVU0277 0.37 -2.1 320,780 + DVU0277 0.43 +0.1 320,783 - DVU0277 0.43 +0.0 320,900 - DVU0277 0.55 -0.0 320,923 + DVU0277 0.58 -0.0 320,931 - DVU0277 0.59 -3.2 320,959 - DVU0277 0.61 -0.1 320,961 + DVU0277 0.62 -0.4 320,969 - DVU0277 0.62 -0.1 320,979 + DVU0277 0.63 +0.0 321,033 + DVU0277 0.69 -0.2 321,033 + DVU0277 0.69 -0.4 321,056 - DVU0277 0.71 +0.0 321,101 - DVU0277 0.76 +0.8 321,117 - DVU0277 0.77 -1.7 321,135 - DVU0277 0.79 -0.6 321,146 + DVU0277 0.80 -0.2 321,260 - -1.6 321,262 + -0.6 321,292 - -0.5 321,361 + -0.0 321,369 + -0.6 321,441 + -0.1 321,497 - -1.2 321,570 + -1.7 321,674 - DVU0278 0.10 -0.4 321,767 - DVU0278 0.32 -2.8 321,807 - DVU0278 0.42 -0.2 321,837 + DVU0278 0.49 -1.7 321,837 + DVU0278 0.49 -0.0 321,842 + DVU0278 0.50 +0.3 321,845 - DVU0278 0.51 -0.3 321,907 - DVU0278 0.65 -0.8 321,909 + DVU0278 0.66 -0.7 321,909 + DVU0278 0.66 -0.4 321,915 + DVU0278 0.67 -0.2 321,948 - DVU0278 0.75 -1.9 321,970 + DVU0278 0.80 -0.6 322,011 + -0.3 322,059 + -0.6 322,067 - +0.3 322,067 - -0.1 322,074 + -2.0 322,082 + -0.5 322,107 - -0.6 322,138 + -0.3 322,146 - -3.0 322,323 + -1.6 322,351 - -0.7 322,435 + +0.7 322,447 + +0.8 322,666 - DVU0279 0.17 +0.2 322,699 - DVU0279 0.19 +0.3 322,704 - DVU0279 0.19 +0.6 322,718 - DVU0279 0.20 +0.2 322,725 + DVU0279 0.20 +0.5 322,899 - DVU0279 0.31 +0.8 322,900 + DVU0279 0.31 +0.8 323,038 + DVU0279 0.39 +0.9
Or see this region's nucleotide sequence