Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2804 and DVU2805 are separated by 46 nucleotides DVU2805 and DVU2806 overlap by 14 nucleotides DVU2806 and DVU2807 are separated by 19 nucleotides
DVU2804: DVU2804 - metallo-beta-lactamase family protein (TIGR), at 2,907,340 to 2,908,497
DVU2804
DVU2805: DVU2805 - cobalamin synthesis protein/P47K family (TIGR), at 2,908,544 to 2,910,490
DVU2805
DVU2806: DVU2806 - MotA/TolQ/ExbB proton channel family protein (TIGR), at 2,910,477 to 2,911,226
DVU2806
DVU2807: DVU2807 - biopolymer transport protein, ExbD/TolR family (TIGR), at 2,911,246 to 2,911,656
DVU2807
Position (kb)
2908
2909
2910
2911 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2907.633 kb on + strand, within DVU2804 at 2907.633 kb on + strand, within DVU2804 at 2907.633 kb on + strand, within DVU2804 at 2907.639 kb on + strand, within DVU2804 at 2907.639 kb on + strand, within DVU2804 at 2907.639 kb on + strand, within DVU2804 at 2907.647 kb on - strand, within DVU2804 at 2907.647 kb on - strand, within DVU2804 at 2907.648 kb on - strand, within DVU2804 at 2907.730 kb on + strand, within DVU2804 at 2907.916 kb on - strand, within DVU2804 at 2907.930 kb on + strand, within DVU2804 at 2907.930 kb on + strand, within DVU2804 at 2907.981 kb on - strand, within DVU2804 at 2908.279 kb on + strand, within DVU2804 at 2908.359 kb on + strand, within DVU2804 at 2908.379 kb on - strand, within DVU2804 at 2908.413 kb on + strand at 2908.418 kb on + strand at 2908.426 kb on - strand at 2908.433 kb on + strand at 2908.443 kb on + strand at 2908.446 kb on - strand at 2908.451 kb on - strand at 2908.595 kb on - strand at 2908.678 kb on + strand at 2908.768 kb on - strand, within DVU2805 at 2908.781 kb on - strand, within DVU2805 at 2908.812 kb on - strand, within DVU2805 at 2908.831 kb on + strand, within DVU2805 at 2908.910 kb on + strand, within DVU2805 at 2909.083 kb on + strand, within DVU2805 at 2909.088 kb on + strand, within DVU2805 at 2909.152 kb on - strand, within DVU2805 at 2909.186 kb on - strand, within DVU2805 at 2909.191 kb on - strand, within DVU2805 at 2909.201 kb on - strand, within DVU2805 at 2909.222 kb on + strand, within DVU2805 at 2909.232 kb on - strand, within DVU2805 at 2909.256 kb on - strand, within DVU2805 at 2909.280 kb on - strand, within DVU2805 at 2909.280 kb on - strand, within DVU2805 at 2909.331 kb on + strand, within DVU2805 at 2909.331 kb on + strand, within DVU2805 at 2909.339 kb on - strand, within DVU2805 at 2909.339 kb on - strand, within DVU2805 at 2909.361 kb on + strand, within DVU2805 at 2909.388 kb on - strand, within DVU2805 at 2909.393 kb on + strand, within DVU2805 at 2909.401 kb on - strand, within DVU2805 at 2909.420 kb on - strand, within DVU2805 at 2909.438 kb on - strand, within DVU2805 at 2909.594 kb on - strand, within DVU2805 at 2909.642 kb on - strand, within DVU2805 at 2909.681 kb on - strand, within DVU2805 at 2909.718 kb on + strand, within DVU2805 at 2909.736 kb on - strand, within DVU2805 at 2909.753 kb on + strand, within DVU2805 at 2909.761 kb on - strand, within DVU2805 at 2909.817 kb on + strand, within DVU2805 at 2909.819 kb on + strand, within DVU2805 at 2909.841 kb on + strand, within DVU2805 at 2909.849 kb on - strand, within DVU2805 at 2909.984 kb on - strand, within DVU2805 at 2910.030 kb on - strand, within DVU2805 at 2910.057 kb on + strand, within DVU2805 at 2910.076 kb on + strand, within DVU2805 at 2910.106 kb on - strand, within DVU2805 at 2910.132 kb on - strand, within DVU2805 at 2910.327 kb on + strand at 2910.365 kb on - strand at 2910.484 kb on + strand at 2910.506 kb on + strand at 2910.514 kb on - strand at 2910.514 kb on - strand at 2910.531 kb on + strand at 2910.622 kb on - strand, within DVU2806 at 2910.622 kb on - strand, within DVU2806 at 2910.622 kb on - strand, within DVU2806 at 2910.622 kb on - strand, within DVU2806 at 2910.622 kb on - strand, within DVU2806 at 2910.645 kb on + strand, within DVU2806 at 2910.704 kb on + strand, within DVU2806 at 2910.770 kb on - strand, within DVU2806 at 2910.784 kb on + strand, within DVU2806 at 2910.799 kb on + strand, within DVU2806 at 2910.802 kb on - strand, within DVU2806 at 2910.855 kb on + strand, within DVU2806 at 2910.981 kb on + strand, within DVU2806 at 2911.046 kb on + strand, within DVU2806 at 2911.115 kb on - strand, within DVU2806 at 2911.208 kb on - strand at 2911.281 kb on - strand at 2911.290 kb on - strand, within DVU2807 at 2911.322 kb on + strand, within DVU2807 at 2911.374 kb on + strand, within DVU2807 at 2911.397 kb on - strand, within DVU2807 at 2911.474 kb on - strand, within DVU2807 at 2911.484 kb on - strand, within DVU2807
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 2,907,633 + DVU2804 0.25 +0.1 2,907,633 + DVU2804 0.25 -0.7 2,907,633 + DVU2804 0.25 -0.1 2,907,639 + DVU2804 0.26 -0.4 2,907,639 + DVU2804 0.26 -2.3 2,907,639 + DVU2804 0.26 -0.1 2,907,647 - DVU2804 0.27 -0.1 2,907,647 - DVU2804 0.27 -0.4 2,907,648 - DVU2804 0.27 -1.0 2,907,730 + DVU2804 0.34 +1.1 2,907,916 - DVU2804 0.50 -0.5 2,907,930 + DVU2804 0.51 -2.2 2,907,930 + DVU2804 0.51 -0.4 2,907,981 - DVU2804 0.55 -0.4 2,908,279 + DVU2804 0.81 -0.2 2,908,359 + DVU2804 0.88 -0.0 2,908,379 - DVU2804 0.90 -0.1 2,908,413 + -0.1 2,908,418 + +0.6 2,908,426 - -0.7 2,908,433 + -0.4 2,908,443 + -0.1 2,908,446 - -1.5 2,908,451 - -0.1 2,908,595 - -0.3 2,908,678 + -0.5 2,908,768 - DVU2805 0.12 -1.2 2,908,781 - DVU2805 0.12 -1.0 2,908,812 - DVU2805 0.14 -0.2 2,908,831 + DVU2805 0.15 -0.6 2,908,910 + DVU2805 0.19 -0.1 2,909,083 + DVU2805 0.28 +0.3 2,909,088 + DVU2805 0.28 -0.7 2,909,152 - DVU2805 0.31 +0.2 2,909,186 - DVU2805 0.33 +1.2 2,909,191 - DVU2805 0.33 -0.3 2,909,201 - DVU2805 0.34 -0.3 2,909,222 + DVU2805 0.35 -0.3 2,909,232 - DVU2805 0.35 -0.3 2,909,256 - DVU2805 0.37 -0.1 2,909,280 - DVU2805 0.38 -0.0 2,909,280 - DVU2805 0.38 -0.3 2,909,331 + DVU2805 0.40 -0.2 2,909,331 + DVU2805 0.40 -0.2 2,909,339 - DVU2805 0.41 -0.1 2,909,339 - DVU2805 0.41 -0.2 2,909,361 + DVU2805 0.42 -0.1 2,909,388 - DVU2805 0.43 -1.0 2,909,393 + DVU2805 0.44 +0.0 2,909,401 - DVU2805 0.44 +0.0 2,909,420 - DVU2805 0.45 -0.4 2,909,438 - DVU2805 0.46 -0.0 2,909,594 - DVU2805 0.54 -0.7 2,909,642 - DVU2805 0.56 +0.7 2,909,681 - DVU2805 0.58 -0.8 2,909,718 + DVU2805 0.60 -0.5 2,909,736 - DVU2805 0.61 -0.5 2,909,753 + DVU2805 0.62 +1.8 2,909,761 - DVU2805 0.63 -0.4 2,909,817 + DVU2805 0.65 -0.1 2,909,819 + DVU2805 0.65 +0.5 2,909,841 + DVU2805 0.67 -0.5 2,909,849 - DVU2805 0.67 -0.0 2,909,984 - DVU2805 0.74 -0.7 2,910,030 - DVU2805 0.76 -0.6 2,910,057 + DVU2805 0.78 -0.7 2,910,076 + DVU2805 0.79 -0.3 2,910,106 - DVU2805 0.80 -2.6 2,910,132 - DVU2805 0.82 -0.4 2,910,327 + -0.4 2,910,365 - +0.3 2,910,484 + -0.5 2,910,506 + -1.3 2,910,514 - +0.2 2,910,514 - -0.1 2,910,531 + -0.7 2,910,622 - DVU2806 0.19 -0.0 2,910,622 - DVU2806 0.19 -0.1 2,910,622 - DVU2806 0.19 -1.4 2,910,622 - DVU2806 0.19 +0.1 2,910,622 - DVU2806 0.19 -0.0 2,910,645 + DVU2806 0.22 -0.1 2,910,704 + DVU2806 0.30 -0.4 2,910,770 - DVU2806 0.39 +0.1 2,910,784 + DVU2806 0.41 +0.1 2,910,799 + DVU2806 0.43 -0.1 2,910,802 - DVU2806 0.43 +0.3 2,910,855 + DVU2806 0.50 +0.1 2,910,981 + DVU2806 0.67 -0.9 2,911,046 + DVU2806 0.76 -0.2 2,911,115 - DVU2806 0.85 -0.1 2,911,208 - +0.2 2,911,281 - +0.5 2,911,290 - DVU2807 0.11 +0.0 2,911,322 + DVU2807 0.18 -0.7 2,911,374 + DVU2807 0.31 +0.4 2,911,397 - DVU2807 0.37 -0.5 2,911,474 - DVU2807 0.55 -0.7 2,911,484 - DVU2807 0.58 -0.2
Or see this region's nucleotide sequence