Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ZUR and znuC overlap by 4 nucleotides znuC and znuB are separated by 1 nucleotides znuB and znuA are separated by 2 nucleotides
DVU1340: ZUR - Zinc uptake transcriptional regulator ZUR (Fur family) (Dmitry Rodionov), at 1,417,766 to 1,418,260
ZUR
DVU1341: znuC - permease component of zinc ABC transporter (Dmitry Rodionov), at 1,418,257 to 1,419,081
znuC
DVU1342: znuB - ATPase component of zinc ABC transporter (Dmitry Rodionov), at 1,419,083 to 1,419,889
znuB
DVU1343: znuA - periplasmic component of zinc ABC transporter (Dmitry Rodionov), at 1,419,892 to 1,420,899
znuA
Position (kb)
1419
1420 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1418.138 kb on - strand, within ZUR at 1418.142 kb on + strand, within ZUR at 1418.150 kb on - strand, within ZUR at 1418.160 kb on - strand, within ZUR at 1418.200 kb on - strand, within ZUR at 1418.208 kb on - strand, within ZUR at 1418.219 kb on + strand at 1418.245 kb on + strand at 1418.279 kb on + strand at 1418.318 kb on - strand at 1418.366 kb on - strand, within znuC at 1418.368 kb on + strand, within znuC at 1418.437 kb on - strand, within znuC at 1418.485 kb on + strand, within znuC at 1418.617 kb on + strand, within znuC at 1418.625 kb on - strand, within znuC at 1418.640 kb on + strand, within znuC at 1418.682 kb on + strand, within znuC at 1418.690 kb on - strand, within znuC at 1418.795 kb on + strand, within znuC at 1418.803 kb on - strand, within znuC at 1418.803 kb on - strand, within znuC at 1418.808 kb on - strand, within znuC at 1418.862 kb on + strand, within znuC at 1418.874 kb on + strand, within znuC at 1418.888 kb on + strand, within znuC at 1418.957 kb on - strand, within znuC at 1419.089 kb on - strand at 1419.227 kb on + strand, within znuB at 1419.238 kb on + strand, within znuB at 1419.265 kb on + strand, within znuB at 1419.265 kb on + strand, within znuB at 1419.325 kb on + strand, within znuB at 1419.403 kb on - strand, within znuB at 1419.410 kb on + strand, within znuB at 1419.457 kb on - strand, within znuB at 1419.457 kb on - strand, within znuB at 1419.493 kb on + strand, within znuB at 1419.496 kb on - strand, within znuB at 1419.498 kb on + strand, within znuB at 1419.498 kb on + strand, within znuB at 1419.498 kb on + strand, within znuB at 1419.572 kb on + strand, within znuB at 1419.593 kb on - strand, within znuB at 1419.595 kb on - strand, within znuB at 1419.626 kb on + strand, within znuB at 1419.626 kb on + strand, within znuB at 1419.723 kb on + strand, within znuB at 1419.733 kb on + strand, within znuB at 1419.823 kb on + strand at 1419.839 kb on - strand at 1419.860 kb on + strand at 1419.861 kb on + strand at 1419.877 kb on - strand at 1420.003 kb on + strand, within znuA at 1420.003 kb on + strand, within znuA at 1420.011 kb on - strand, within znuA at 1420.011 kb on - strand, within znuA at 1420.011 kb on - strand, within znuA at 1420.035 kb on + strand, within znuA at 1420.046 kb on + strand, within znuA at 1420.111 kb on - strand, within znuA at 1420.142 kb on + strand, within znuA at 1420.159 kb on + strand, within znuA at 1420.200 kb on + strand, within znuA at 1420.204 kb on + strand, within znuA at 1420.221 kb on + strand, within znuA at 1420.239 kb on - strand, within znuA at 1420.291 kb on + strand, within znuA at 1420.315 kb on - strand, within znuA at 1420.382 kb on + strand, within znuA at 1420.440 kb on - strand, within znuA at 1420.482 kb on - strand, within znuA at 1420.542 kb on - strand, within znuA at 1420.610 kb on + strand, within znuA at 1420.649 kb on + strand, within znuA
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 1,418,138 - ZUR DVU1340 0.75 +0.5 1,418,142 + ZUR DVU1340 0.76 -0.2 1,418,150 - ZUR DVU1340 0.78 -0.5 1,418,160 - ZUR DVU1340 0.80 -0.6 1,418,200 - ZUR DVU1340 0.88 -1.5 1,418,208 - ZUR DVU1340 0.89 -2.2 1,418,219 + -0.0 1,418,245 + -0.1 1,418,279 + -1.9 1,418,318 - -0.5 1,418,366 - znuC DVU1341 0.13 -2.5 1,418,368 + znuC DVU1341 0.13 -2.5 1,418,437 - znuC DVU1341 0.22 -0.4 1,418,485 + znuC DVU1341 0.28 -2.1 1,418,617 + znuC DVU1341 0.44 -1.7 1,418,625 - znuC DVU1341 0.45 -3.0 1,418,640 + znuC DVU1341 0.46 -0.0 1,418,682 + znuC DVU1341 0.52 -1.9 1,418,690 - znuC DVU1341 0.52 -2.4 1,418,795 + znuC DVU1341 0.65 -3.0 1,418,803 - znuC DVU1341 0.66 -2.5 1,418,803 - znuC DVU1341 0.66 -3.8 1,418,808 - znuC DVU1341 0.67 -2.3 1,418,862 + znuC DVU1341 0.73 -2.2 1,418,874 + znuC DVU1341 0.75 -1.7 1,418,888 + znuC DVU1341 0.76 -2.6 1,418,957 - znuC DVU1341 0.85 -3.0 1,419,089 - -0.1 1,419,227 + znuB DVU1342 0.18 -0.0 1,419,238 + znuB DVU1342 0.19 -3.4 1,419,265 + znuB DVU1342 0.23 -2.7 1,419,265 + znuB DVU1342 0.23 -1.7 1,419,325 + znuB DVU1342 0.30 -2.2 1,419,403 - znuB DVU1342 0.40 -2.5 1,419,410 + znuB DVU1342 0.41 -1.5 1,419,457 - znuB DVU1342 0.46 -2.3 1,419,457 - znuB DVU1342 0.46 -2.5 1,419,493 + znuB DVU1342 0.51 -1.8 1,419,496 - znuB DVU1342 0.51 -2.1 1,419,498 + znuB DVU1342 0.51 -2.6 1,419,498 + znuB DVU1342 0.51 -1.9 1,419,498 + znuB DVU1342 0.51 -2.4 1,419,572 + znuB DVU1342 0.61 -1.9 1,419,593 - znuB DVU1342 0.63 -1.7 1,419,595 - znuB DVU1342 0.63 -2.4 1,419,626 + znuB DVU1342 0.67 -3.6 1,419,626 + znuB DVU1342 0.67 -2.7 1,419,723 + znuB DVU1342 0.79 -4.3 1,419,733 + znuB DVU1342 0.81 -2.5 1,419,823 + -2.0 1,419,839 - -2.5 1,419,860 + -2.8 1,419,861 + -2.4 1,419,877 - -1.3 1,420,003 + znuA DVU1343 0.11 -2.4 1,420,003 + znuA DVU1343 0.11 -2.3 1,420,011 - znuA DVU1343 0.12 -3.1 1,420,011 - znuA DVU1343 0.12 -1.3 1,420,011 - znuA DVU1343 0.12 -2.4 1,420,035 + znuA DVU1343 0.14 -2.6 1,420,046 + znuA DVU1343 0.15 -1.9 1,420,111 - znuA DVU1343 0.22 -2.4 1,420,142 + znuA DVU1343 0.25 -2.6 1,420,159 + znuA DVU1343 0.26 -1.5 1,420,200 + znuA DVU1343 0.31 -2.5 1,420,204 + znuA DVU1343 0.31 -2.7 1,420,221 + znuA DVU1343 0.33 -2.6 1,420,239 - znuA DVU1343 0.34 -2.2 1,420,291 + znuA DVU1343 0.40 -2.1 1,420,315 - znuA DVU1343 0.42 -2.0 1,420,382 + znuA DVU1343 0.49 -2.5 1,420,440 - znuA DVU1343 0.54 -2.4 1,420,482 - znuA DVU1343 0.59 -1.8 1,420,542 - znuA DVU1343 0.64 -3.2 1,420,610 + znuA DVU1343 0.71 -2.2 1,420,649 + znuA DVU1343 0.75 -3.0
Or see this region's nucleotide sequence