Experiment: Pyruvate-Sulfate (60-15mM) with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1168 and DVU1169 are separated by 97 nucleotides DVU1169 and DVU1170 are separated by 311 nucleotides
DVU1168: DVU1168 - hypothetical protein (TIGR), at 1,260,521 to 1,260,937
DVU1168
DVU1169: DVU1169 - methyl-accepting chemotaxis protein (TIGR), at 1,261,035 to 1,263,449
DVU1169
DVU1170: DVU1170 - hypothetical protein (TIGR), at 1,263,761 to 1,263,949
DVU1170
Position (kb)
1261
1262
1263
1264 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1260.358 kb on + strand at 1260.411 kb on - strand at 1260.411 kb on - strand at 1260.421 kb on - strand at 1260.553 kb on + strand at 1260.613 kb on - strand, within DVU1168 at 1260.626 kb on + strand, within DVU1168 at 1260.660 kb on + strand, within DVU1168 at 1260.662 kb on + strand, within DVU1168 at 1260.663 kb on - strand, within DVU1168 at 1260.670 kb on - strand, within DVU1168 at 1260.834 kb on + strand, within DVU1168 at 1260.852 kb on - strand, within DVU1168 at 1260.852 kb on - strand, within DVU1168 at 1260.873 kb on + strand, within DVU1168 at 1260.884 kb on - strand, within DVU1168 at 1260.917 kb on - strand at 1260.996 kb on - strand at 1261.098 kb on - strand at 1261.191 kb on + strand at 1261.284 kb on - strand, within DVU1169 at 1261.326 kb on + strand, within DVU1169 at 1261.348 kb on + strand, within DVU1169 at 1261.353 kb on + strand, within DVU1169 at 1261.552 kb on + strand, within DVU1169 at 1261.560 kb on - strand, within DVU1169 at 1261.602 kb on - strand, within DVU1169 at 1261.694 kb on - strand, within DVU1169 at 1261.773 kb on - strand, within DVU1169 at 1261.797 kb on - strand, within DVU1169 at 1261.817 kb on + strand, within DVU1169 at 1261.827 kb on + strand, within DVU1169 at 1262.039 kb on - strand, within DVU1169 at 1262.083 kb on + strand, within DVU1169 at 1262.091 kb on - strand, within DVU1169 at 1262.091 kb on - strand, within DVU1169 at 1262.133 kb on + strand, within DVU1169 at 1262.133 kb on + strand, within DVU1169 at 1262.172 kb on - strand, within DVU1169 at 1262.205 kb on + strand, within DVU1169 at 1262.208 kb on + strand, within DVU1169 at 1262.256 kb on - strand, within DVU1169 at 1262.406 kb on + strand, within DVU1169 at 1262.408 kb on + strand, within DVU1169 at 1262.517 kb on + strand, within DVU1169 at 1262.552 kb on + strand, within DVU1169 at 1262.560 kb on - strand, within DVU1169 at 1262.562 kb on - strand, within DVU1169 at 1262.603 kb on - strand, within DVU1169 at 1262.686 kb on + strand, within DVU1169 at 1262.705 kb on - strand, within DVU1169 at 1262.741 kb on - strand, within DVU1169 at 1262.798 kb on - strand, within DVU1169 at 1262.848 kb on - strand, within DVU1169 at 1262.987 kb on - strand, within DVU1169 at 1262.995 kb on + strand, within DVU1169 at 1263.005 kb on + strand, within DVU1169 at 1263.205 kb on - strand, within DVU1169 at 1263.268 kb on - strand at 1263.270 kb on + strand at 1263.278 kb on - strand at 1263.574 kb on - strand at 1263.736 kb on + strand at 1263.744 kb on - strand at 1263.774 kb on - strand at 1263.774 kb on - strand at 1263.802 kb on + strand, within DVU1170 at 1263.919 kb on + strand, within DVU1170 at 1264.027 kb on - strand at 1264.037 kb on - strand at 1264.121 kb on - strand at 1264.237 kb on + strand at 1264.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Molybdate 100uM remove 1,260,358 + -0.1 1,260,411 - -0.1 1,260,411 - +0.4 1,260,421 - -0.4 1,260,553 + -4.1 1,260,613 - DVU1168 0.22 +0.2 1,260,626 + DVU1168 0.25 +0.6 1,260,660 + DVU1168 0.33 -0.2 1,260,662 + DVU1168 0.34 -0.3 1,260,663 - DVU1168 0.34 -0.5 1,260,670 - DVU1168 0.36 -0.0 1,260,834 + DVU1168 0.75 +0.0 1,260,852 - DVU1168 0.79 +0.9 1,260,852 - DVU1168 0.79 +0.0 1,260,873 + DVU1168 0.84 +0.1 1,260,884 - DVU1168 0.87 +0.1 1,260,917 - -0.0 1,260,996 - -0.2 1,261,098 - -0.3 1,261,191 + -2.0 1,261,284 - DVU1169 0.10 +0.8 1,261,326 + DVU1169 0.12 -0.6 1,261,348 + DVU1169 0.13 -0.7 1,261,353 + DVU1169 0.13 +0.4 1,261,552 + DVU1169 0.21 +0.5 1,261,560 - DVU1169 0.22 -0.3 1,261,602 - DVU1169 0.23 -0.7 1,261,694 - DVU1169 0.27 -0.4 1,261,773 - DVU1169 0.31 -0.2 1,261,797 - DVU1169 0.32 -0.5 1,261,817 + DVU1169 0.32 -0.0 1,261,827 + DVU1169 0.33 +0.0 1,262,039 - DVU1169 0.42 -0.4 1,262,083 + DVU1169 0.43 +0.1 1,262,091 - DVU1169 0.44 -0.9 1,262,091 - DVU1169 0.44 -1.0 1,262,133 + DVU1169 0.45 -0.4 1,262,133 + DVU1169 0.45 -0.7 1,262,172 - DVU1169 0.47 -2.1 1,262,205 + DVU1169 0.48 -1.4 1,262,208 + DVU1169 0.49 -0.4 1,262,256 - DVU1169 0.51 +1.0 1,262,406 + DVU1169 0.57 -0.4 1,262,408 + DVU1169 0.57 +0.2 1,262,517 + DVU1169 0.61 -0.8 1,262,552 + DVU1169 0.63 +0.5 1,262,560 - DVU1169 0.63 -1.1 1,262,562 - DVU1169 0.63 -0.5 1,262,603 - DVU1169 0.65 -0.6 1,262,686 + DVU1169 0.68 +0.3 1,262,705 - DVU1169 0.69 -1.0 1,262,741 - DVU1169 0.71 -0.7 1,262,798 - DVU1169 0.73 -0.5 1,262,848 - DVU1169 0.75 -0.8 1,262,987 - DVU1169 0.81 -1.3 1,262,995 + DVU1169 0.81 -1.3 1,263,005 + DVU1169 0.82 -0.5 1,263,205 - DVU1169 0.90 -0.9 1,263,268 - -0.3 1,263,270 + -0.8 1,263,278 - +0.4 1,263,574 - -0.1 1,263,736 + -0.4 1,263,744 - -1.3 1,263,774 - +1.0 1,263,774 - -0.7 1,263,802 + DVU1170 0.22 -1.5 1,263,919 + DVU1170 0.84 -0.4 1,264,027 - -2.2 1,264,037 - +0.5 1,264,121 - +0.2 1,264,237 + -0.5 1,264,255 - -0.2
Or see this region's nucleotide sequence