Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5562

Experiment: L-Asparagine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (N)
6,379,669	+		Pf6N2E2_5561	0.11	-0.7
6,379,669	+		Pf6N2E2_5561	0.11	+0.4
6,379,669	+		Pf6N2E2_5561	0.11	-2.4
6,379,678	+		Pf6N2E2_5561	0.12	-0.2
6,379,678	+		Pf6N2E2_5561	0.12	+0.8
6,379,679	-		Pf6N2E2_5561	0.12	-0.2
6,379,679	-		Pf6N2E2_5561	0.12	+0.4
6,379,739	+		Pf6N2E2_5561	0.19	+0.1
6,379,756	+		Pf6N2E2_5561	0.21	-0.5
6,379,830	-		Pf6N2E2_5561	0.29	+0.4
6,379,830	-		Pf6N2E2_5561	0.29	+0.5
6,379,830	-		Pf6N2E2_5561	0.29	-0.7
6,379,832	+		Pf6N2E2_5561	0.29	+1.0
6,379,832	+		Pf6N2E2_5561	0.29	-0.4
6,379,832	+		Pf6N2E2_5561	0.29	+0.1
6,379,833	-		Pf6N2E2_5561	0.29	+0.2
6,379,833	-		Pf6N2E2_5561	0.29	-0.1
6,379,897	+		Pf6N2E2_5561	0.37	-0.3
6,379,898	-		Pf6N2E2_5561	0.37	+0.4
6,379,898	-		Pf6N2E2_5561	0.37	-2.7
6,379,966	+				-0.7
6,379,966	+		Pf6N2E2_5561	0.44	-0.2
6,379,966	+		Pf6N2E2_5561	0.44	+0.3
6,379,966	+		Pf6N2E2_5561	0.44	-0.6
6,379,966	+		Pf6N2E2_5561	0.44	-2.6
6,379,966	+		Pf6N2E2_5561	0.44	+0.8
6,379,967	-		Pf6N2E2_5561	0.44	-0.9
6,379,967	-		Pf6N2E2_5561	0.44	-0.2
6,379,967	-		Pf6N2E2_5561	0.44	+0.5
6,379,967	-		Pf6N2E2_5561	0.44	-0.6
6,380,137	+		Pf6N2E2_5561	0.64	-0.4
6,380,137	+		Pf6N2E2_5561	0.64	+0.1
6,380,138	-		Pf6N2E2_5561	0.64	+0.6
6,380,138	-		Pf6N2E2_5561	0.64	-0.0
6,380,180	+		Pf6N2E2_5561	0.68	+0.2
6,380,181	-		Pf6N2E2_5561	0.69	-0.1
6,380,181	-		Pf6N2E2_5561	0.69	-1.5
6,380,181	-		Pf6N2E2_5561	0.69	-0.1
6,380,372	-				+0.3
6,380,467	-				+0.4
6,380,543	+				-0.1
6,380,543	+				+0.7
6,380,543	+				-1.2
6,380,543	+				-0.9
6,380,543	+				-0.7
6,380,544	-				-0.0
6,380,544	-				+0.1
6,380,685	+		Pf6N2E2_5562	0.11	-0.8
6,380,685	+		Pf6N2E2_5562	0.11	+0.0
6,380,685	+		Pf6N2E2_5562	0.11	-0.8
6,380,685	+		Pf6N2E2_5562	0.11	-0.8
6,380,686	-		Pf6N2E2_5562	0.11	-3.2
6,380,686	-		Pf6N2E2_5562	0.11	+0.2
6,380,759	-		Pf6N2E2_5562	0.19	-0.3
6,380,838	+		Pf6N2E2_5562	0.28	+0.2
6,380,839	-		Pf6N2E2_5562	0.28	-1.8
6,380,839	-		Pf6N2E2_5562	0.28	-0.3
6,380,839	-		Pf6N2E2_5562	0.28	+0.5
6,380,839	-		Pf6N2E2_5562	0.28	-0.6
6,380,839	-		Pf6N2E2_5562	0.28	+0.2
6,380,839	-		Pf6N2E2_5562	0.28	-0.3
6,380,839	-		Pf6N2E2_5562	0.28	+0.4
6,380,839	-		Pf6N2E2_5562	0.28	+0.9
6,380,839	-		Pf6N2E2_5562	0.28	-0.8
6,380,862	+		Pf6N2E2_5562	0.31	+0.3
6,380,862	+		Pf6N2E2_5562	0.31	-0.6
6,380,862	+		Pf6N2E2_5562	0.31	-0.3
6,380,863	-		Pf6N2E2_5562	0.31	-0.3
6,380,865	+		Pf6N2E2_5562	0.31	-1.4
6,380,865	+		Pf6N2E2_5562	0.31	-1.0
6,380,865	+		Pf6N2E2_5562	0.31	+0.3
6,380,865	+		Pf6N2E2_5562	0.31	-0.1
6,380,865	+		Pf6N2E2_5562	0.31	-0.4
6,380,866	-		Pf6N2E2_5562	0.32	-0.1
6,380,866	-		Pf6N2E2_5562	0.32	+0.3
6,380,866	-		Pf6N2E2_5562	0.32	+0.1
6,380,970	+		Pf6N2E2_5562	0.43	-2.0
6,381,270	+		Pf6N2E2_5562	0.77	+0.5
6,381,270	+		Pf6N2E2_5562	0.77	+1.3
6,381,270	+		Pf6N2E2_5562	0.77	-0.7
6,381,271	-		Pf6N2E2_5562	0.78	-2.0
6,381,271	-		Pf6N2E2_5562	0.78	+0.3
6,381,271	-		Pf6N2E2_5562	0.78	-0.4
6,381,321	+		Pf6N2E2_5562	0.83	-0.6
6,381,322	-		Pf6N2E2_5562	0.83	-0.2
6,381,391	+				+1.6
6,381,391	+				-0.8
6,381,391	+				-1.7
6,381,391	+				-2.0
6,381,392	-				-1.3
6,381,392	-				+0.1
6,381,392	-				+0.8
6,381,392	-				-1.0
6,381,392	-				-0.2
6,381,392	-				-1.5
6,381,392	-				+0.8
6,381,392	-				+1.0
6,381,480	-				-0.5
6,381,511	+				-0.7
6,381,511	+				-0.3
6,381,511	+				+0.3
6,381,556	+				-0.3
6,381,556	+				-0.7
6,381,556	+				+0.5
6,381,556	+				-1.0
6,381,557	-				-0.1
6,381,638	+				+0.6
6,381,638	+				-0.6
6,381,638	+				+0.7
6,381,638	+				+0.0
6,381,638	+				-0.6
6,381,639	-				-0.3
6,381,639	-				+0.4
6,381,639	-				+0.3
6,381,639	-				-0.8
6,381,639	-				+1.1
6,381,639	-				-0.3
6,381,820	+		Pf6N2E2_5563	0.25	-0.0
6,381,820	+		Pf6N2E2_5563	0.25	+0.1
6,381,820	+		Pf6N2E2_5563	0.25	+0.2
6,381,820	+		Pf6N2E2_5563	0.25	+0.1
6,381,820	+		Pf6N2E2_5563	0.25	+0.4
6,381,820	+		Pf6N2E2_5563	0.25	-0.9
6,381,820	+		Pf6N2E2_5563	0.25	+0.5
6,381,820	+		Pf6N2E2_5563	0.25	+0.4
6,381,820	+		Pf6N2E2_5563	0.25	-0.8
6,381,820	+		Pf6N2E2_5563	0.25	+0.3
6,381,820	+		Pf6N2E2_5563	0.25	-0.4
6,381,820	+		Pf6N2E2_5563	0.25	-0.2
6,381,821	-		Pf6N2E2_5563	0.25	-1.9
6,381,821	-		Pf6N2E2_5563	0.25	+0.9
6,381,821	-		Pf6N2E2_5563	0.25	-0.4
6,381,821	-		Pf6N2E2_5563	0.25	+1.6
6,381,987	-		Pf6N2E2_5563	0.52	+0.9
6,382,026	+		Pf6N2E2_5563	0.58	+1.0
6,382,026	+		Pf6N2E2_5563	0.58	-0.8
6,382,026	+		Pf6N2E2_5563	0.58	-0.1
6,382,027	-		Pf6N2E2_5563	0.58	+1.5
6,382,066	+		Pf6N2E2_5563	0.65	-0.2
6,382,066	+		Pf6N2E2_5563	0.65	+0.1
6,382,066	+		Pf6N2E2_5563	0.65	+0.7
6,382,066	+		Pf6N2E2_5563	0.65	+0.2
6,382,067	-		Pf6N2E2_5563	0.65	+0.8
6,382,067	-		Pf6N2E2_5563	0.65	+0.2
6,382,067	-		Pf6N2E2_5563	0.65	+1.1
6,382,067	-		Pf6N2E2_5563	0.65	+1.0
6,382,067	-		Pf6N2E2_5563	0.65	+0.5
6,382,331	+				+0.3
6,382,331	+				+0.3
6,382,332	-				+0.9
6,382,332	-				-0.6
6,382,332	-				+0.7
6,382,332	-				+0.5
6,382,443	+		Pf6N2E2_5564	0.32	-1.8
6,382,443	+		Pf6N2E2_5564	0.32	-2.4
6,382,443	+		Pf6N2E2_5564	0.32	+0.1
6,382,443	+		Pf6N2E2_5564	0.32	-2.2
6,382,443	+		Pf6N2E2_5564	0.32	-2.6
6,382,443	+		Pf6N2E2_5564	0.32	-3.0
6,382,443	+		Pf6N2E2_5564	0.32	-1.5
6,382,443	+		Pf6N2E2_5564	0.32	-1.5
6,382,443	+		Pf6N2E2_5564	0.32	-2.6
6,382,444	-		Pf6N2E2_5564	0.32	-2.8
6,382,444	-		Pf6N2E2_5564	0.32	-2.6
6,382,444	-		Pf6N2E2_5564	0.32	-4.1
6,382,444	-		Pf6N2E2_5564	0.32	-1.6
6,382,444	-		Pf6N2E2_5564	0.32	-2.4
6,382,444	-		Pf6N2E2_5564	0.32	-1.3
6,382,458	+		Pf6N2E2_5564	0.37	-2.4
6,382,459	-		Pf6N2E2_5564	0.37	-3.4
6,382,467	+		Pf6N2E2_5564	0.39	-1.7
6,382,467	+		Pf6N2E2_5564	0.39	-1.7
6,382,467	+		Pf6N2E2_5564	0.39	+1.3