Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3024

Experiment: BHIS with Thioridazine 0.025 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Thioridazine 0.025 mM
3,823,435	+		BT3023	0.50	-3.2
3,823,493	-		BT3023	0.56	+1.7
3,823,495	-		BT3023	0.56	-1.1
3,823,531	+		BT3023	0.60	+1.2
3,823,612	+		BT3023	0.69	+2.8
3,823,613	-		BT3023	0.69	-0.9
3,823,613	-		BT3023	0.69	-0.9
3,823,613	-		BT3023	0.69	+0.1
3,823,663	-		BT3023	0.75	+2.9
3,823,676	+		BT3023	0.76	-0.9
3,823,764	+		BT3023	0.86	-1.4
3,823,765	-		BT3023	0.86	+2.3
3,823,768	-		BT3023	0.86	+3.1
3,823,793	+		BT3023	0.89	+0.9
3,823,793	+		BT3023	0.89	-0.2
3,823,793	+				-0.9
3,823,794	-		BT3023	0.89	+1.3
3,823,794	-		BT3023	0.89	+1.4
3,823,794	-		BT3023	0.89	-0.3
3,823,807	+				-3.2
3,823,869	+				-0.9
3,823,870	-				+0.1
3,823,870	-				-1.0
3,823,912	-				-1.5
3,823,915	-				+0.1
3,823,915	-				-1.7
3,823,915	-				-2.0
3,823,936	-				-1.3
3,823,940	+				+3.4
3,823,941	-				+3.6
3,823,967	+				-0.9
3,823,967	+				+0.9
3,823,984	+				-1.9
3,823,985	-				-1.0
3,823,985	-				-3.9
3,823,994	+				-2.0
3,823,994	+				-2.6
3,823,995	-				-1.9
3,823,995	-				-0.9
3,824,014	+				-1.9
3,824,035	+				+1.5
3,824,041	+				-1.6
3,824,050	+				-4.1
3,824,050	+				-1.5
3,824,081	+				-1.2
3,824,096	-				+0.1
3,824,109	+				-1.1
3,824,109	+				-2.4
3,824,109	+				-1.5
3,824,109	+				+0.7
3,824,110	-				+0.1
3,824,110	-				+0.1
3,824,113	+				-1.5
3,824,114	-				+2.9
3,824,114	-				-1.1
3,824,114	-				+3.3
3,824,114	-				-0.2
3,824,120	-				-1.7
3,824,120	-				-2.2
3,824,121	+				+2.7
3,824,147	+				-4.0
3,824,148	-				+0.7
3,824,148	-				+1.5
3,824,148	-				-3.1
3,824,153	-				-2.2
3,824,188	+				+2.4
3,824,191	+				-3.7
3,824,209	-				+0.1
3,824,232	+				+0.5
3,824,233	-				+2.1
3,824,233	-				-1.5
3,824,268	-				-1.7
3,824,268	-				+0.6
3,824,278	-				-1.1
3,824,278	-				-3.1
3,824,286	-				+1.1
3,824,307	-				-1.9
3,824,325	+				-1.5
3,824,398	-				-1.7
3,824,403	-				-2.1
3,824,403	-				-3.1
3,824,406	-				+0.7
3,824,415	+				+0.1
3,824,416	-				+0.1
3,824,463	+				-0.5
3,824,580	-				-1.2
3,824,596	-				-1.4
3,824,627	+				-1.5
3,824,645	+				-2.8
3,824,649	+				-1.9
3,824,660	+				+1.8
3,824,696	+				+1.1
3,824,696	+				+0.1
3,824,697	-				+2.4
3,824,697	-				-2.7
3,824,701	-				-1.3
3,824,701	-				-1.3
3,824,701	-				-1.5
3,824,701	-				+3.3
3,824,712	+				-2.3
3,824,732	+		BT3024	0.10	-2.4
3,824,733	-		BT3024	0.10	+0.9
3,824,783	+		BT3024	0.12	-1.9
3,824,783	+				-2.2
3,824,843	+		BT3024	0.14	-2.2
3,824,864	+		BT3024	0.15	+2.7
3,824,864	+		BT3024	0.15	-0.4
3,824,902	-		BT3024	0.16	+1.8
3,824,915	+		BT3024	0.16	-1.8
3,824,922	+		BT3024	0.17	-2.0
3,824,933	+		BT3024	0.17	-1.0
3,824,958	-		BT3024	0.18	+2.5
3,824,979	+		BT3024	0.18	-2.2
3,824,986	-		BT3024	0.19	-1.6
3,825,003	+		BT3024	0.19	-1.9
3,825,003	+		BT3024	0.19	-0.9
3,825,084	+		BT3024	0.22	-0.9
3,825,103	-		BT3024	0.22	-1.4
3,825,117	+		BT3024	0.23	-3.4
3,825,122	+		BT3024	0.23	-0.9
3,825,123	-		BT3024	0.23	+0.1
3,825,190	+		BT3024	0.25	-0.5
3,825,313	+		BT3024	0.29	-0.9
3,825,313	+		BT3024	0.29	-1.5
3,825,313	+		BT3024	0.29	+0.1
3,825,328	-		BT3024	0.30	+1.1
3,825,358	+		BT3024	0.31	-0.9
3,825,359	-		BT3024	0.31	-2.1
3,825,376	+		BT3024	0.31	-0.2
3,825,376	+		BT3024	0.31	-0.1
3,825,377	-		BT3024	0.31	-1.8
3,825,385	-		BT3024	0.32	-0.5
3,825,426	+		BT3024	0.33	-1.9
3,825,483	+		BT3024	0.35	+1.7
3,825,491	+		BT3024	0.35	-1.8
3,825,491	+		BT3024	0.35	-2.1
3,825,491	+		BT3024	0.35	-0.2
3,825,514	+		BT3024	0.36	-2.6
3,825,571	+		BT3024	0.38	-1.5
3,825,579	+		BT3024	0.38	+2.4
3,825,580	-		BT3024	0.38	-1.9
3,825,580	-		BT3024	0.38	+1.1
3,825,720	-		BT3024	0.43	-0.6
3,825,724	+		BT3024	0.43	-1.6
3,825,737	+		BT3024	0.43	-0.5
3,825,738	-		BT3024	0.43	-0.5
3,825,738	-		BT3024	0.43	+0.1
3,825,738	-		BT3024	0.43	+1.4
3,825,738	-				-1.9
3,825,756	+		BT3024	0.44	-3.3
3,825,756	+		BT3024	0.44	-2.9
3,825,759	+		BT3024	0.44	-1.5
3,825,759	+		BT3024	0.44	+2.1
3,825,760	-		BT3024	0.44	+3.9
3,825,760	-		BT3024	0.44	+0.9
3,825,772	+		BT3024	0.44	+0.1
3,825,772	+		BT3024	0.44	-2.0
3,825,773	-		BT3024	0.44	-1.6
3,825,782	+		BT3024	0.45	-1.5
3,825,782	+		BT3024	0.45	-0.9
3,825,783	-		BT3024	0.45	-0.9
3,825,860	+		BT3024	0.47	+1.1
3,825,861	-		BT3024	0.47	-2.7
3,825,877	+		BT3024	0.48	-2.7
3,825,885	+		BT3024	0.48	+1.9
3,825,885	+		BT3024	0.48	-1.9
3,825,885	+		BT3024	0.48	-2.7
3,825,885	+		BT3024	0.48	-0.5
3,825,886	-		BT3024	0.48	+2.1
3,825,923	-		BT3024	0.49	-2.2
3,826,007	+		BT3024	0.52	+2.1
3,826,008	-		BT3024	0.52	-1.3
3,826,058	+		BT3024	0.54	+1.3
3,826,059	-		BT3024	0.54	+1.7
3,826,081	+		BT3024	0.54	-0.5
3,826,082	-		BT3024	0.54	-3.2
3,826,099	+		BT3024	0.55	-2.7
3,826,100	-		BT3024	0.55	-3.3
3,826,104	-		BT3024	0.55	-2.5
3,826,159	+		BT3024	0.57	+1.1
3,826,182	+		BT3024	0.58	-1.1
3,826,182	+		BT3024	0.58	+0.1
3,826,215	+		BT3024	0.59	-1.9
3,826,262	-		BT3024	0.60	-1.1
3,826,262	-		BT3024	0.60	-1.5
3,826,266	+		BT3024	0.60	+0.1
3,826,266	+		BT3024	0.60	+0.1
3,826,294	+		BT3024	0.61	+0.1
3,826,294	+		BT3024	0.61	-1.4
3,826,295	-		BT3024	0.61	-1.5
3,826,314	-		BT3024	0.62	+0.1
3,826,334	-		BT3024	0.63	+3.6
3,826,344	+		BT3024	0.63	+1.1
3,826,365	+		BT3024	0.64	-2.7
3,826,365	+		BT3024	0.64	-3.2
3,826,366	-		BT3024	0.64	-2.5
3,826,366	-		BT3024	0.64	-2.3
3,826,372	+		BT3024	0.64	-2.2
3,826,373	-		BT3024	0.64	+0.6
3,826,424	-		BT3024	0.65	-0.6
3,826,452	-		BT3024	0.66	-0.4
3,826,470	+		BT3024	0.67	+1.7
3,826,489	-		BT3024	0.68	-1.9
3,826,494	+		BT3024	0.68	-1.0
3,826,511	+		BT3024	0.68	-3.6
3,826,525	-		BT3024	0.69	+1.9
3,826,534	-		BT3024	0.69	-4.0
3,826,534	-		BT3024	0.69	-2.7
3,826,555	-		BT3024	0.70	+1.1
3,826,555	-		BT3024	0.70	-1.5
3,826,575	-		BT3024	0.70	-1.2
3,826,636	+		BT3024	0.72	-3.5
3,826,636	+		BT3024	0.72	-1.8
3,826,637	-		BT3024	0.72	-1.5
3,826,639	+		BT3024	0.73	-0.3
3,826,640	-		BT3024	0.73	-1.7
3,826,720	+		BT3024	0.75	+3.7
3,826,750	-		BT3024	0.76	-0.9
3,826,755	+		BT3024	0.76	-0.7
3,826,840	+		BT3024	0.79	+1.9
3,826,843	-		BT3024	0.79	-1.2
3,826,949	+		BT3024	0.83	-1.6
3,827,040	-		BT3024	0.86	+2.4
3,827,051	+		BT3024	0.86	-3.1
3,827,055	+		BT3024	0.86	-1.8
3,827,151	+		BT3024	0.89	-2.2
3,827,198	-				-2.9
3,827,228	-				+2.3
3,827,228	-				-3.0
3,827,260	-				-1.5
3,827,260	-				-0.8
3,827,399	-				+1.1
3,827,399	-				-0.1
3,827,449	-				-2.5
3,827,479	+				+1.7
3,827,480	-				+3.1
3,827,499	-				+1.1
3,827,515	-				+2.7
3,827,542	+				+1.5
3,827,543	-				-1.3
3,827,545	-				-1.6
3,827,545	-				+0.8
3,827,623	+				-0.9
3,827,652	+				-1.5
3,827,653	-				-1.5
3,827,710	+		BT3025	0.12	+0.9
3,827,710	+		BT3025	0.12	-1.6
3,827,710	+		BT3025	0.12	+1.4
3,827,711	-		BT3025	0.12	-1.6
3,827,711	-		BT3025	0.12	-0.7
3,827,766	+		BT3025	0.15	-1.2
3,827,770	+		BT3025	0.15	-1.9
3,827,897	-		BT3025	0.23	+3.3
3,827,898	+		BT3025	0.23	-4.7
3,828,066	+		BT3025	0.34	+1.7
3,828,093	-		BT3025	0.35	+1.1
3,828,144	+		BT3025	0.38	-1.6
3,828,165	+		BT3025	0.40	+2.7
3,828,178	-		BT3025	0.40	-1.8
3,828,197	+		BT3025	0.42	+1.1
3,828,198	-		BT3025	0.42	-1.6
3,828,198	-		BT3025	0.42	+0.5
3,828,198	-		BT3025	0.42	-1.6
3,828,199	+		BT3025	0.42	+1.3
3,828,237	-		BT3025	0.44	-2.5
3,828,239	+		BT3025	0.44	-1.8
3,828,240	-		BT3025	0.44	-2.2
3,828,244	-		BT3025	0.44	-0.9
3,828,244	-		BT3025	0.44	+1.7
3,828,403	+		BT3025	0.54	-0.5
3,828,403	+		BT3025	0.54	-1.9
3,828,474	-		BT3025	0.59	+1.5