Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0768

Experiment: BHIS with Thioridazine 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0767 and BT0768 overlap by 17 nucleotidesBT0768 and BT0769 are separated by 280 nucleotidesBT0769 and BT0770 are separated by 39 nucleotides BT0767: BT0767 - putative para-aminobenzoate synthase component I (NCBI ptt file), at 957,437 to 958,429 BT0767 BT0768: BT0768 - putative para-aminobenzoate synthase component I (NCBI ptt file), at 958,413 to 959,009 BT0768 BT0769: BT0769 - conserved hypothetical protein (NCBI ptt file), at 959,290 to 959,961 BT0769 BT0770: BT0770 - conserved hypothetical protein (NCBI ptt file), at 960,001 to 960,447 BT0770 Position (kb) 958 959 960Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 957.445 kb on - strandat 957.581 kb on + strand, within BT0767at 957.582 kb on - strand, within BT0767at 957.583 kb on + strand, within BT0767at 957.584 kb on - strand, within BT0767at 957.684 kb on - strand, within BT0767at 957.717 kb on + strand, within BT0767at 957.791 kb on - strand, within BT0767at 957.816 kb on - strand, within BT0767at 957.982 kb on + strand, within BT0767at 957.983 kb on - strand, within BT0767at 958.011 kb on + strand, within BT0767at 958.011 kb on + strand, within BT0767at 958.017 kb on + strand, within BT0767at 958.046 kb on + strand, within BT0767at 958.054 kb on + strand, within BT0767at 958.131 kb on - strand, within BT0767at 958.291 kb on + strand, within BT0767at 958.306 kb on - strand, within BT0767at 958.544 kb on + strand, within BT0768at 958.545 kb on - strand, within BT0768at 958.546 kb on + strand, within BT0768at 958.547 kb on - strand, within BT0768at 958.591 kb on - strand, within BT0768at 958.674 kb on - strand, within BT0768at 958.680 kb on + strand, within BT0768at 958.694 kb on + strand, within BT0768at 958.806 kb on + strand, within BT0768at 958.817 kb on + strand, within BT0768at 958.817 kb on + strand, within BT0768at 958.818 kb on - strand, within BT0768at 958.888 kb on + strand, within BT0768at 958.957 kb on + strandat 959.091 kb on + strandat 959.137 kb on + strandat 959.381 kb on - strand, within BT0769at 959.387 kb on + strand, within BT0769at 959.530 kb on + strand, within BT0769at 959.532 kb on + strand, within BT0769at 959.593 kb on + strand, within BT0769at 959.593 kb on + strand, within BT0769at 959.701 kb on + strand, within BT0769at 959.703 kb on + strand, within BT0769at 959.977 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction BHIS with Thioridazine 0.025 mM
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957,445 - +2.2
957,581 + BT0767 0.15 -1.2
957,582 - BT0767 0.15 +3.1
957,583 + BT0767 0.15 -3.2
957,584 - BT0767 0.15 +1.8
957,684 - BT0767 0.25 +0.8
957,717 + BT0767 0.28 -0.2
957,791 - BT0767 0.36 -0.2
957,816 - BT0767 0.38 -0.5
957,982 + BT0767 0.55 +0.3
957,983 - BT0767 0.55 -1.8
958,011 + BT0767 0.58 -2.8
958,011 + BT0767 0.58 +0.8
958,017 + BT0767 0.58 -1.2
958,046 + BT0767 0.61 +0.8
958,054 + BT0767 0.62 -1.5
958,131 - BT0767 0.70 +0.2
958,291 + BT0767 0.86 +3.5
958,306 - BT0767 0.88 +0.8
958,544 + BT0768 0.22 -1.8
958,545 - BT0768 0.22 -1.5
958,546 + BT0768 0.22 -0.2
958,547 - BT0768 0.22 -1.8
958,591 - BT0768 0.30 -2.2
958,674 - BT0768 0.44 +1.5
958,680 + BT0768 0.45 -2.8
958,694 + BT0768 0.47 -1.1
958,806 + BT0768 0.66 -1.5
958,817 + BT0768 0.68 -1.7
958,817 + BT0768 0.68 -3.2
958,818 - BT0768 0.68 -2.2
958,888 + BT0768 0.80 -1.2
958,957 + -0.7
959,091 + -0.2
959,137 + -2.4
959,381 - BT0769 0.14 -0.2
959,387 + BT0769 0.14 -1.5
959,530 + BT0769 0.36 -0.2
959,532 + BT0769 0.36 +1.3
959,593 + BT0769 0.45 +2.1
959,593 + BT0769 0.45 -1.8
959,701 + BT0769 0.61 -2.8
959,703 + BT0769 0.61 -0.8
959,977 + -2.8

Or see this region's nucleotide sequence