Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4341

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
5,063,648	+		Pf6N2E2_4340	0.38	+0.8
5,063,648	+		Pf6N2E2_4340	0.38	+0.4
5,063,648	+		Pf6N2E2_4340	0.38	+0.3
5,063,648	+		Pf6N2E2_4340	0.38	+0.2
5,063,648	+		Pf6N2E2_4340	0.38	+2.4
5,063,649	-		Pf6N2E2_4340	0.38	-0.1
5,063,667	-		Pf6N2E2_4340	0.39	+2.1
5,063,783	+		Pf6N2E2_4340	0.48	+0.5
5,063,784	-		Pf6N2E2_4340	0.48	+0.6
5,064,438	+				+0.4
5,064,439	-				+1.6
5,064,439	-				+2.1
5,064,477	+				+1.0
5,064,477	+				+1.2
5,064,477	+				+2.3
5,064,478	-				+2.4
5,064,478	-				+3.2
5,064,478	-				+0.6
5,064,596	+				+1.1
5,064,596	+				-0.6
5,064,596	+				-1.3
5,064,597	-				+1.0
5,064,597	-				+2.6
5,064,811	+		Pf6N2E2_4341	0.10	+1.0
5,064,811	+		Pf6N2E2_4341	0.10	+2.0
5,064,811	+		Pf6N2E2_4341	0.10	+2.0
5,064,812	-		Pf6N2E2_4341	0.10	+1.5
5,064,826	+		Pf6N2E2_4341	0.11	+1.1
5,064,826	+		Pf6N2E2_4341	0.11	-1.4
5,065,000	+		Pf6N2E2_4341	0.16	+0.2
5,065,001	-		Pf6N2E2_4341	0.16	+2.6
5,065,001	-		Pf6N2E2_4341	0.16	+1.8
5,065,001	-		Pf6N2E2_4341	0.16	+0.5
5,065,006	-		Pf6N2E2_4341	0.16	+1.9
5,065,195	+		Pf6N2E2_4341	0.21	+1.8
5,065,195	+		Pf6N2E2_4341	0.21	+1.8
5,065,196	-		Pf6N2E2_4341	0.21	+0.5
5,065,225	+		Pf6N2E2_4341	0.22	-0.8
5,065,225	+		Pf6N2E2_4341	0.22	+0.3
5,065,226	-		Pf6N2E2_4341	0.22	+1.6
5,065,270	+		Pf6N2E2_4341	0.23	-0.2
5,065,270	+		Pf6N2E2_4341	0.23	+1.9
5,065,270	+		Pf6N2E2_4341	0.23	+1.9
5,065,270	+		Pf6N2E2_4341	0.23	+2.1
5,065,271	-		Pf6N2E2_4341	0.23	+0.9
5,065,271	-		Pf6N2E2_4341	0.23	+0.2
5,065,462	+		Pf6N2E2_4341	0.29	+2.5
5,065,463	-		Pf6N2E2_4341	0.29	+1.8
5,065,463	-		Pf6N2E2_4341	0.29	+1.8
5,065,570	+		Pf6N2E2_4341	0.32	+3.4
5,065,570	+		Pf6N2E2_4341	0.32	+2.2
5,065,570	+		Pf6N2E2_4341	0.32	+3.0
5,065,571	-		Pf6N2E2_4341	0.32	+1.0
5,065,571	-		Pf6N2E2_4341	0.32	+1.6
5,065,571	-		Pf6N2E2_4341	0.32	+1.8
5,065,571	-		Pf6N2E2_4341	0.32	-0.2
5,065,571	-		Pf6N2E2_4341	0.32	-0.1
5,065,687	+		Pf6N2E2_4341	0.35	+2.3
5,065,687	+		Pf6N2E2_4341	0.35	+2.5
5,065,688	-		Pf6N2E2_4341	0.35	+2.8
5,065,846	+		Pf6N2E2_4341	0.40	-0.8
5,065,864	+		Pf6N2E2_4341	0.40	+1.0
5,065,864	+		Pf6N2E2_4341	0.40	+1.1
5,065,864	+		Pf6N2E2_4341	0.40	+0.6
5,065,865	-		Pf6N2E2_4341	0.40	+0.6
5,065,865	-		Pf6N2E2_4341	0.40	+2.0
5,065,865	-		Pf6N2E2_4341	0.40	+1.9
5,065,865	-		Pf6N2E2_4341	0.40	+3.9
5,065,865	-		Pf6N2E2_4341	0.40	+1.2
5,065,865	-		Pf6N2E2_4341	0.40	-0.2
5,066,021	-		Pf6N2E2_4341	0.45	+2.4
5,066,149	+		Pf6N2E2_4341	0.48	+1.1
5,066,167	+		Pf6N2E2_4341	0.49	+2.9
5,066,168	-		Pf6N2E2_4341	0.49	+2.8
5,066,168	-		Pf6N2E2_4341	0.49	-0.2
5,066,194	+		Pf6N2E2_4341	0.50	+2.4
5,066,195	-		Pf6N2E2_4341	0.50	-0.1
5,066,195	-		Pf6N2E2_4341	0.50	+0.2
5,066,399	-		Pf6N2E2_4341	0.55	+0.3
5,066,399	-		Pf6N2E2_4341	0.55	+1.5
5,066,399	-		Pf6N2E2_4341	0.55	+1.8
5,066,666	+		Pf6N2E2_4341	0.63	+0.1
5,066,666	+		Pf6N2E2_4341	0.63	+0.3
5,066,666	+		Pf6N2E2_4341	0.63	+1.4
5,066,666	+		Pf6N2E2_4341	0.63	+0.5
5,066,666	+		Pf6N2E2_4341	0.63	+2.1
5,066,667	-		Pf6N2E2_4341	0.63	+1.2
5,066,667	-		Pf6N2E2_4341	0.63	+0.9
5,066,667	-		Pf6N2E2_4341	0.63	+0.7
5,066,667	-		Pf6N2E2_4341	0.63	+1.3
5,066,678	-		Pf6N2E2_4341	0.63	+0.2
5,066,678	-		Pf6N2E2_4341	0.63	+0.8
5,066,689	+		Pf6N2E2_4341	0.64	+0.0
5,066,690	-		Pf6N2E2_4341	0.64	+0.5
5,066,690	-		Pf6N2E2_4341	0.64	+1.1
5,066,690	-		Pf6N2E2_4341	0.64	+1.2
5,066,879	+		Pf6N2E2_4341	0.69	+0.1
5,066,879	+		Pf6N2E2_4341	0.69	+0.3
5,066,879	+		Pf6N2E2_4341	0.69	+0.8
5,066,880	-		Pf6N2E2_4341	0.69	+1.3
5,067,070	+		Pf6N2E2_4341	0.75	+3.0
5,067,070	+		Pf6N2E2_4341	0.75	+1.2
5,067,070	+		Pf6N2E2_4341	0.75	-0.3
5,067,070	+		Pf6N2E2_4341	0.75	+1.2
5,067,071	-		Pf6N2E2_4341	0.75	+1.1
5,067,071	-		Pf6N2E2_4341	0.75	+1.6
5,067,071	-		Pf6N2E2_4341	0.75	+1.2
5,067,071	-		Pf6N2E2_4341	0.75	-0.4
5,067,071	-		Pf6N2E2_4341	0.75	-0.4
5,067,295	+		Pf6N2E2_4341	0.81	+0.7
5,067,296	-		Pf6N2E2_4341	0.81	+1.4
5,067,403	+		Pf6N2E2_4341	0.84	+1.2
5,067,403	+		Pf6N2E2_4341	0.84	+1.6
5,067,404	-		Pf6N2E2_4341	0.84	+2.2
5,067,404	-		Pf6N2E2_4341	0.84	+2.4
5,067,404	-		Pf6N2E2_4341	0.84	+1.4
5,067,404	-		Pf6N2E2_4341	0.84	+0.2
5,067,427	+		Pf6N2E2_4341	0.85	+1.2
5,067,427	+		Pf6N2E2_4341	0.85	+2.7
5,067,427	+		Pf6N2E2_4341	0.85	+0.6
5,067,428	-		Pf6N2E2_4341	0.85	+0.1
5,067,428	-		Pf6N2E2_4341	0.85	+2.0
5,067,428	-		Pf6N2E2_4341	0.85	+0.7
5,067,428	-		Pf6N2E2_4341	0.85	+1.3
5,067,652	+				+0.9
5,067,878	-				+2.5
5,067,878	-				+0.1
5,067,954	-				-1.4
5,067,959	+				-0.8
5,067,959	+				-0.8
5,067,959	+				-1.1
5,067,960	-				-2.4
5,067,960	-				+2.3
5,067,960	-				-0.5
5,068,107	+		Pf6N2E2_4342	0.23	-0.9
5,068,107	+		Pf6N2E2_4342	0.23	+1.1
5,068,107	+		Pf6N2E2_4342	0.23	-1.1
5,068,108	-		Pf6N2E2_4342	0.24	-0.1
5,068,108	-		Pf6N2E2_4342	0.24	+0.5
5,068,108	-		Pf6N2E2_4342	0.24	-0.1
5,068,191	-		Pf6N2E2_4342	0.36	+0.9
5,068,605	+				+3.9
5,068,605	+				-2.3
5,068,605	+				+1.6
5,068,606	-				+3.1
5,068,606	-				+1.1
5,068,606	-				-0.7
5,068,606	-				+0.4
5,068,606	-				-0.9
5,068,714	+		Pf6N2E2_4343	0.14	-1.1
5,068,758	+		Pf6N2E2_4343	0.20	+0.1
5,068,758	+		Pf6N2E2_4343	0.20	-0.2
5,068,758	+		Pf6N2E2_4343	0.20	+0.3
5,068,759	-		Pf6N2E2_4343	0.21	-1.2
5,068,759	-		Pf6N2E2_4343	0.21	+2.0
5,068,821	+		Pf6N2E2_4343	0.29	+2.3
5,068,822	-		Pf6N2E2_4343	0.29	+0.8
5,068,822	-		Pf6N2E2_4343	0.29	+1.6
5,068,822	-		Pf6N2E2_4343	0.29	+1.1