Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3944 and Pf6N2E2_3945 are separated by 68 nucleotides Pf6N2E2_3945 and Pf6N2E2_3946 are separated by 49 nucleotides Pf6N2E2_3946 and Pf6N2E2_3947 are separated by 115 nucleotides Pf6N2E2_3947 and Pf6N2E2_3948 are separated by 86 nucleotides
Pf6N2E2_3944 - Protein of unknown function DUF81, at 4,581,868 to 4,582,668
_3944
Pf6N2E2_3945 - Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-), at 4,582,737 to 4,583,546
_3945
Pf6N2E2_3946 - Thymidylate synthase (EC 2.1.1.45), at 4,583,596 to 4,584,567
_3946
Pf6N2E2_3947 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 4,584,683 to 4,585,129
_3947
Pf6N2E2_3948 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 4,585,216 to 4,587,435
_3948
Position (kb)
4583
4584
4585 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.682 kb on + strand at 4582.723 kb on + strand at 4583.511 kb on + strand at 4583.511 kb on + strand at 4585.024 kb on - strand, within Pf6N2E2_3947 at 4585.071 kb on + strand, within Pf6N2E2_3947 at 4585.074 kb on + strand, within Pf6N2E2_3947 at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.180 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 4,582,637 + -0.9 4,582,637 + -1.4 4,582,637 + +1.3 4,582,637 + +0.0 4,582,637 + +0.9 4,582,682 + -0.2 4,582,723 + -1.7 4,583,511 + -1.3 4,583,511 + -0.3 4,585,024 - Pf6N2E2_3947 0.76 -0.9 4,585,071 + Pf6N2E2_3947 0.87 -0.2 4,585,074 + Pf6N2E2_3947 0.87 -1.2 4,585,146 + -1.9 4,585,146 + +0.1 4,585,146 + +2.3 4,585,146 + -0.0 4,585,146 + -1.2 4,585,146 + +0.2 4,585,147 - +0.0 4,585,147 - -0.1 4,585,147 - +0.7 4,585,147 - -1.5 4,585,147 - -0.9 4,585,147 - +0.7 4,585,147 - +0.8 4,585,147 - -1.2 4,585,180 + -0.8
Or see this region's nucleotide sequence