Experiment: MoYLS4 with Molybdate 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1827 and gidA are separated by 2 nucleotides gidA and DVU1830 are separated by 260 nucleotides
DVU1827: DVU1827 - acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein (TIGR), at 1,892,330 to 1,893,553
DVU1827
DVU1828: gidA - glucose inhibited division protein A (TIGR), at 1,893,556 to 1,895,445
gidA
DVU1830: DVU1830 - hypothetical protein (TIGR), at 1,895,706 to 1,896,770
DVU1830
Position (kb)
1893
1894
1895
1896 Strain fitness (log2 ratio)
-2
-1
0
1 at 1892.586 kb on + strand, within DVU1827 at 1892.594 kb on - strand, within DVU1827 at 1892.694 kb on + strand, within DVU1827 at 1892.696 kb on + strand, within DVU1827 at 1892.974 kb on + strand, within DVU1827 at 1893.185 kb on + strand, within DVU1827 at 1893.185 kb on + strand, within DVU1827 at 1893.193 kb on - strand, within DVU1827 at 1893.434 kb on - strand at 1893.436 kb on + strand at 1893.496 kb on - strand at 1893.507 kb on + strand at 1893.531 kb on + strand at 1893.539 kb on - strand at 1893.597 kb on - strand at 1893.823 kb on + strand, within gidA at 1893.987 kb on + strand, within gidA at 1894.222 kb on + strand, within gidA at 1894.227 kb on - strand, within gidA at 1894.353 kb on - strand, within gidA at 1894.528 kb on + strand, within gidA at 1894.675 kb on + strand, within gidA at 1894.688 kb on - strand, within gidA at 1894.688 kb on - strand, within gidA at 1894.977 kb on + strand, within gidA at 1895.086 kb on + strand, within gidA at 1895.087 kb on - strand, within gidA at 1895.098 kb on + strand, within gidA at 1895.621 kb on + strand at 1895.643 kb on - strand at 1895.673 kb on - strand at 1895.715 kb on + strand at 1895.748 kb on - strand at 1895.761 kb on + strand at 1895.789 kb on + strand at 1895.797 kb on - strand at 1895.861 kb on + strand, within DVU1830 at 1895.902 kb on - strand, within DVU1830 at 1895.935 kb on + strand, within DVU1830 at 1896.019 kb on + strand, within DVU1830 at 1896.115 kb on + strand, within DVU1830 at 1896.123 kb on - strand, within DVU1830 at 1896.123 kb on - strand, within DVU1830 at 1896.158 kb on + strand, within DVU1830 at 1896.385 kb on - strand, within DVU1830
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM remove 1,892,586 + DVU1827 0.21 -0.3 1,892,594 - DVU1827 0.22 -0.3 1,892,694 + DVU1827 0.30 -0.4 1,892,696 + DVU1827 0.30 -0.2 1,892,974 + DVU1827 0.53 -0.1 1,893,185 + DVU1827 0.70 -0.2 1,893,185 + DVU1827 0.70 +0.1 1,893,193 - DVU1827 0.71 -0.1 1,893,434 - -0.0 1,893,436 + -0.7 1,893,496 - -0.3 1,893,507 + -0.6 1,893,531 + +0.8 1,893,539 - -0.3 1,893,597 - +0.2 1,893,823 + gidA DVU1828 0.14 -2.1 1,893,987 + gidA DVU1828 0.23 -0.6 1,894,222 + gidA DVU1828 0.35 -1.7 1,894,227 - gidA DVU1828 0.36 -1.9 1,894,353 - gidA DVU1828 0.42 -0.6 1,894,528 + gidA DVU1828 0.51 -0.3 1,894,675 + gidA DVU1828 0.59 -1.6 1,894,688 - gidA DVU1828 0.60 -0.1 1,894,688 - gidA DVU1828 0.60 -0.4 1,894,977 + gidA DVU1828 0.75 -2.7 1,895,086 + gidA DVU1828 0.81 -0.5 1,895,087 - gidA DVU1828 0.81 -1.2 1,895,098 + gidA DVU1828 0.82 -1.8 1,895,621 + -0.3 1,895,643 - -1.4 1,895,673 - -1.1 1,895,715 + -2.7 1,895,748 - -2.1 1,895,761 + -2.3 1,895,789 + -0.8 1,895,797 - -1.2 1,895,861 + DVU1830 0.15 -0.6 1,895,902 - DVU1830 0.18 -1.3 1,895,935 + DVU1830 0.22 -2.1 1,896,019 + DVU1830 0.29 -0.3 1,896,115 + DVU1830 0.38 -2.7 1,896,123 - DVU1830 0.39 -1.6 1,896,123 - DVU1830 0.39 -1.5 1,896,158 + DVU1830 0.42 -0.0 1,896,385 - DVU1830 0.64 -1.6
Or see this region's nucleotide sequence