Experiment: m.b. Nalidixic 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g153 and HP15_p187g154 are separated by 209 nucleotides HP15_p187g154 and HP15_p187g155 are separated by 104 nucleotides
HP15_p187g153: HP15_p187g153 - hypothetical protein, at 154,833 to 155,483
_p187g153
HP15_p187g154: HP15_p187g154 - hypothetical protein, at 155,693 to 155,833
_p187g154
HP15_p187g155: HP15_p187g155 - amidohydrolase, at 155,938 to 157,410
_p187g155
Position (kb) 155
156 Strain fitness (log2 ratio) -2
-1
0
1
2 at 154.699 kb on + strand at 154.714 kb on - strand at 154.921 kb on + strand, within HP15_p187g153 at 154.921 kb on + strand, within HP15_p187g153 at 154.929 kb on - strand, within HP15_p187g153 at 154.929 kb on - strand, within HP15_p187g153 at 154.943 kb on + strand, within HP15_p187g153 at 154.943 kb on + strand, within HP15_p187g153 at 154.955 kb on + strand, within HP15_p187g153 at 154.995 kb on - strand, within HP15_p187g153 at 155.065 kb on + strand, within HP15_p187g153 at 155.073 kb on - strand, within HP15_p187g153 at 155.073 kb on - strand, within HP15_p187g153 at 155.122 kb on - strand, within HP15_p187g153 at 155.133 kb on + strand, within HP15_p187g153 at 155.220 kb on - strand, within HP15_p187g153 at 155.269 kb on + strand, within HP15_p187g153 at 155.275 kb on - strand, within HP15_p187g153 at 155.277 kb on - strand, within HP15_p187g153 at 155.339 kb on + strand at 155.339 kb on + strand, within HP15_p187g153 at 155.339 kb on + strand, within HP15_p187g153 at 155.339 kb on + strand, within HP15_p187g153 at 155.347 kb on - strand, within HP15_p187g153 at 155.478 kb on + strand at 155.478 kb on + strand at 155.494 kb on + strand at 155.519 kb on - strand at 155.552 kb on + strand at 155.557 kb on + strand at 155.559 kb on + strand at 155.559 kb on + strand at 155.559 kb on + strand at 155.559 kb on + strand at 155.560 kb on - strand at 155.560 kb on - strand at 155.560 kb on - strand at 155.560 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.567 kb on - strand at 155.573 kb on + strand at 155.578 kb on + strand at 155.586 kb on - strand at 155.586 kb on - strand at 155.644 kb on - strand at 155.675 kb on - strand at 155.678 kb on + strand at 155.678 kb on + strand at 155.686 kb on - strand at 155.690 kb on + strand at 155.703 kb on - strand at 155.740 kb on + strand, within HP15_p187g154 at 155.804 kb on + strand, within HP15_p187g154 at 155.804 kb on + strand, within HP15_p187g154 at 155.817 kb on - strand, within HP15_p187g154 at 155.903 kb on - strand at 155.912 kb on + strand at 155.920 kb on + strand at 155.927 kb on + strand at 155.937 kb on + strand at 155.945 kb on - strand at 156.021 kb on + strand at 156.029 kb on - strand at 156.049 kb on - strand at 156.069 kb on + strand at 156.073 kb on - strand at 156.077 kb on - strand at 156.087 kb on + strand, within HP15_p187g155 at 156.105 kb on + strand, within HP15_p187g155 at 156.130 kb on + strand, within HP15_p187g155 at 156.130 kb on + strand, within HP15_p187g155 at 156.182 kb on + strand, within HP15_p187g155 at 156.216 kb on + strand, within HP15_p187g155 at 156.224 kb on - strand, within HP15_p187g155 at 156.226 kb on + strand, within HP15_p187g155 at 156.234 kb on - strand, within HP15_p187g155 at 156.234 kb on - strand, within HP15_p187g155 at 156.239 kb on - strand, within HP15_p187g155 at 156.338 kb on + strand, within HP15_p187g155 at 156.346 kb on - strand, within HP15_p187g155 at 156.380 kb on - strand, within HP15_p187g155 at 156.382 kb on + strand, within HP15_p187g155 at 156.451 kb on + strand, within HP15_p187g155 at 156.451 kb on + strand, within HP15_p187g155 at 156.451 kb on + strand, within HP15_p187g155 at 156.451 kb on + strand, within HP15_p187g155 at 156.462 kb on + strand, within HP15_p187g155 at 156.470 kb on - strand, within HP15_p187g155 at 156.472 kb on + strand, within HP15_p187g155 at 156.482 kb on + strand, within HP15_p187g155 at 156.482 kb on - strand, within HP15_p187g155 at 156.485 kb on - strand, within HP15_p187g155 at 156.485 kb on - strand, within HP15_p187g155 at 156.491 kb on - strand, within HP15_p187g155 at 156.491 kb on - strand, within HP15_p187g155 at 156.518 kb on + strand, within HP15_p187g155 at 156.518 kb on + strand, within HP15_p187g155 at 156.518 kb on + strand, within HP15_p187g155 at 156.518 kb on + strand, within HP15_p187g155 at 156.523 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.526 kb on - strand, within HP15_p187g155 at 156.537 kb on + strand, within HP15_p187g155 at 156.540 kb on - strand, within HP15_p187g155 at 156.543 kb on - strand, within HP15_p187g155 at 156.567 kb on + strand, within HP15_p187g155 at 156.575 kb on - strand, within HP15_p187g155 at 156.575 kb on - strand, within HP15_p187g155 at 156.667 kb on - strand, within HP15_p187g155 at 156.722 kb on + strand, within HP15_p187g155 at 156.777 kb on + strand, within HP15_p187g155 at 156.777 kb on + strand, within HP15_p187g155 at 156.785 kb on - strand, within HP15_p187g155 at 156.785 kb on - strand, within HP15_p187g155 at 156.785 kb on - strand, within HP15_p187g155 at 156.785 kb on - strand, within HP15_p187g155 at 156.805 kb on + strand, within HP15_p187g155 at 156.824 kb on - strand, within HP15_p187g155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.032 mg/ml remove 154,699 + +0.6 154,714 - -0.3 154,921 + HP15_p187g153 0.14 -0.6 154,921 + HP15_p187g153 0.14 +0.0 154,929 - HP15_p187g153 0.15 +2.4 154,929 - HP15_p187g153 0.15 -0.2 154,943 + HP15_p187g153 0.17 -0.6 154,943 + HP15_p187g153 0.17 +0.0 154,955 + HP15_p187g153 0.19 -0.2 154,995 - HP15_p187g153 0.25 -0.0 155,065 + HP15_p187g153 0.36 -0.0 155,073 - HP15_p187g153 0.37 +0.6 155,073 - HP15_p187g153 0.37 +0.0 155,122 - HP15_p187g153 0.44 +1.4 155,133 + HP15_p187g153 0.46 +0.8 155,220 - HP15_p187g153 0.59 +0.5 155,269 + HP15_p187g153 0.67 -1.0 155,275 - HP15_p187g153 0.68 -0.3 155,277 - HP15_p187g153 0.68 -1.0 155,339 + -1.2 155,339 + HP15_p187g153 0.78 +0.3 155,339 + HP15_p187g153 0.78 -0.4 155,339 + HP15_p187g153 0.78 +0.1 155,347 - HP15_p187g153 0.79 +1.4 155,478 + +0.4 155,478 + +0.4 155,494 + +0.1 155,519 - -0.6 155,552 + -0.3 155,557 + -1.2 155,559 + -0.4 155,559 + -0.3 155,559 + -0.3 155,559 + +0.4 155,560 - +1.1 155,560 - +1.0 155,560 - -0.6 155,560 - +0.2 155,567 - -0.4 155,567 - +2.4 155,567 - -0.6 155,567 - -0.5 155,567 - -0.4 155,567 - +0.4 155,567 - -0.6 155,567 - -0.0 155,573 + -0.3 155,578 + -0.2 155,586 - -0.2 155,586 - -0.2 155,644 - -0.6 155,675 - +0.3 155,678 + +0.6 155,678 + +1.9 155,686 - -0.2 155,690 + -0.2 155,703 - -0.5 155,740 + HP15_p187g154 0.33 -0.3 155,804 + HP15_p187g154 0.79 -1.0 155,804 + HP15_p187g154 0.79 -0.2 155,817 - HP15_p187g154 0.88 -1.3 155,903 - -0.9 155,912 + -1.6 155,920 + -2.0 155,927 + +0.1 155,937 + +0.2 155,945 - -1.6 156,021 + +0.1 156,029 - +0.4 156,049 - +0.4 156,069 + -0.1 156,073 - +0.0 156,077 - -0.2 156,087 + HP15_p187g155 0.10 -0.2 156,105 + HP15_p187g155 0.11 -0.1 156,130 + HP15_p187g155 0.13 -0.2 156,130 + HP15_p187g155 0.13 -1.9 156,182 + HP15_p187g155 0.17 +1.4 156,216 + HP15_p187g155 0.19 -1.2 156,224 - HP15_p187g155 0.19 +0.1 156,226 + HP15_p187g155 0.20 +0.2 156,234 - HP15_p187g155 0.20 +0.9 156,234 - HP15_p187g155 0.20 +1.7 156,239 - HP15_p187g155 0.20 +0.7 156,338 + HP15_p187g155 0.27 -0.4 156,346 - HP15_p187g155 0.28 -1.6 156,380 - HP15_p187g155 0.30 +0.4 156,382 + HP15_p187g155 0.30 -0.9 156,451 + HP15_p187g155 0.35 -0.6 156,451 + HP15_p187g155 0.35 -0.9 156,451 + HP15_p187g155 0.35 -0.5 156,451 + HP15_p187g155 0.35 +1.0 156,462 + HP15_p187g155 0.36 +0.8 156,470 - HP15_p187g155 0.36 -0.2 156,472 + HP15_p187g155 0.36 -1.0 156,482 + HP15_p187g155 0.37 -1.1 156,482 - HP15_p187g155 0.37 -1.2 156,485 - HP15_p187g155 0.37 -0.6 156,485 - HP15_p187g155 0.37 +0.4 156,491 - HP15_p187g155 0.38 -0.4 156,491 - HP15_p187g155 0.38 -0.4 156,518 + HP15_p187g155 0.39 +0.1 156,518 + HP15_p187g155 0.39 +0.2 156,518 + HP15_p187g155 0.39 -0.0 156,518 + HP15_p187g155 0.39 -0.5 156,523 - HP15_p187g155 0.40 +0.0 156,526 - HP15_p187g155 0.40 +1.5 156,526 - HP15_p187g155 0.40 -0.2 156,526 - HP15_p187g155 0.40 -0.2 156,526 - HP15_p187g155 0.40 +0.5 156,526 - HP15_p187g155 0.40 -0.1 156,526 - HP15_p187g155 0.40 -0.5 156,526 - HP15_p187g155 0.40 -1.1 156,526 - HP15_p187g155 0.40 +0.1 156,537 + HP15_p187g155 0.41 +0.1 156,540 - HP15_p187g155 0.41 -0.6 156,543 - HP15_p187g155 0.41 -0.0 156,567 + HP15_p187g155 0.43 +0.6 156,575 - HP15_p187g155 0.43 +0.0 156,575 - HP15_p187g155 0.43 +0.8 156,667 - HP15_p187g155 0.49 +0.7 156,722 + HP15_p187g155 0.53 +0.1 156,777 + HP15_p187g155 0.57 +0.3 156,777 + HP15_p187g155 0.57 +0.2 156,785 - HP15_p187g155 0.58 -0.4 156,785 - HP15_p187g155 0.58 -0.4 156,785 - HP15_p187g155 0.58 +0.1 156,785 - HP15_p187g155 0.58 -0.6 156,805 + HP15_p187g155 0.59 +0.2 156,824 - HP15_p187g155 0.60 +0.4
Or see this region's nucleotide sequence