Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02185

Experiment: PYE recovery after M5G phosphate starvation and 48hr streptomycin treatment in 2L flask

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE recovery after M5G phosphate starvation and 48hr streptomycin treatment in 2L flask
2,335,134	+				+0.2
2,335,157	+				-1.7
2,335,176	+				-0.2
2,335,178	+				+0.2
2,335,178	+				+0.4
2,335,186	-				-0.4
2,335,186	-				-2.7
2,335,186	-				-1.9
2,335,186	-				-1.2
2,335,222	-		CCNA_02184	0.15	-0.2
2,335,242	+		CCNA_02184	0.20	+0.2
2,335,247	+		CCNA_02184	0.21	-0.9
2,335,285	+		CCNA_02184	0.29	-0.6
2,335,302	+		CCNA_02184	0.32	+0.5
2,335,322	+				-0.8
2,335,370	+		CCNA_02184	0.47	-0.0
2,335,377	+		CCNA_02184	0.48	-0.3
2,335,382	+		CCNA_02184	0.49	-0.3
2,335,402	-		CCNA_02184	0.54	-0.2
2,335,404	-		CCNA_02184	0.54	-0.7
2,335,413	+		CCNA_02184	0.56	+1.6
2,335,413	+		CCNA_02184	0.56	+1.6
2,335,426	-		CCNA_02184	0.59	+0.2
2,335,431	+		CCNA_02184	0.60	-1.0
2,335,431	+		CCNA_02184	0.60	+0.5
2,335,439	-		CCNA_02184	0.62	-1.8
2,335,440	+		CCNA_02184	0.62	-1.6
2,335,464	+		CCNA_02184	0.67	-0.4
2,335,477	+		CCNA_02184	0.70	+0.1
2,335,490	-		CCNA_02184	0.72	-0.6
2,335,547	-		CCNA_02184	0.85	+0.8
2,335,612	+				+0.1
2,335,613	-				-0.9
2,335,635	-				+0.5
2,335,657	+				-1.1
2,335,660	-				-1.0
2,335,665	-				-0.7
2,335,736	+				-0.2
2,335,737	+				-0.0
2,335,755	-				-0.9
2,335,758	-				+0.5
2,335,766	-				+0.2
2,335,767	-				+0.4
2,335,767	-				+0.3
2,335,959	+				-2.0
2,336,022	+				-1.5
2,336,041	+				-0.7
2,336,156	+				-2.8
2,336,184	+				-3.9
2,336,184	+				-4.5
2,336,192	-				-2.8
2,336,205	+				-4.1
2,336,227	-		CCNA_02185	0.11	-0.4
2,336,243	+		CCNA_02185	0.12	-2.0
2,336,245	+		CCNA_02185	0.12	-2.4
2,336,245	+		CCNA_02185	0.12	-2.9
2,336,251	+		CCNA_02185	0.12	-1.7
2,336,251	+		CCNA_02185	0.12	-1.0
2,336,251	-		CCNA_02185	0.12	-1.7
2,336,253	-		CCNA_02185	0.13	-4.0
2,336,273	+		CCNA_02185	0.14	-2.5
2,336,281	-		CCNA_02185	0.14	-2.4
2,336,284	+		CCNA_02185	0.14	-2.5
2,336,284	+		CCNA_02185	0.14	-4.0
2,336,284	+		CCNA_02185	0.14	-3.7
2,336,287	-		CCNA_02185	0.14	-2.4
2,336,292	-		CCNA_02185	0.15	-2.8
2,336,292	-		CCNA_02185	0.15	-1.3
2,336,294	+		CCNA_02185	0.15	-2.5
2,336,302	-		CCNA_02185	0.15	-1.3
2,336,318	-		CCNA_02185	0.16	-3.8
2,336,338	+		CCNA_02185	0.17	-3.0
2,336,388	-		CCNA_02185	0.20	-2.5
2,336,416	-		CCNA_02185	0.22	-1.8
2,336,442	+		CCNA_02185	0.23	-3.3
2,336,452	-		CCNA_02185	0.24	-3.0
2,336,466	+		CCNA_02185	0.24	-2.3
2,336,483	-		CCNA_02185	0.25	-1.8
2,336,498	+		CCNA_02185	0.26	-5.8
2,336,508	+		CCNA_02185	0.27	-2.7
2,336,537	+		CCNA_02185	0.28	-1.4
2,336,540	-		CCNA_02185	0.28	-3.2
2,336,545	-		CCNA_02185	0.29	-2.3
2,336,545	-		CCNA_02185	0.29	-3.1
2,336,556	+		CCNA_02185	0.29	-2.7
2,336,556	+		CCNA_02185	0.29	-1.4
2,336,556	+		CCNA_02185	0.29	-3.2
2,336,563	-		CCNA_02185	0.30	-1.3
2,336,563	-		CCNA_02185	0.30	-2.5
2,336,564	-		CCNA_02185	0.30	-3.9
2,336,564	-		CCNA_02185	0.30	-3.1
2,336,564	-		CCNA_02185	0.30	-5.1
2,336,589	-		CCNA_02185	0.31	-2.7
2,336,614	+		CCNA_02185	0.33	-3.6
2,336,614	+		CCNA_02185	0.33	+0.8
2,336,619	+		CCNA_02185	0.33	-2.7
2,336,621	+		CCNA_02185	0.33	-3.0
2,336,621	+		CCNA_02185	0.33	-4.2
2,336,622	-		CCNA_02185	0.33	-1.0
2,336,622	-		CCNA_02185	0.33	-1.2
2,336,627	-		CCNA_02185	0.33	-0.9
2,336,627	-		CCNA_02185	0.33	-4.1
2,336,629	-		CCNA_02185	0.33	-1.7
2,336,629	-		CCNA_02185	0.33	-0.4
2,336,629	-		CCNA_02185	0.33	-4.3
2,336,634	+		CCNA_02185	0.34	-2.8
2,336,634	+		CCNA_02185	0.34	-2.4
2,336,657	+		CCNA_02185	0.35	-5.0
2,336,716	+		CCNA_02185	0.38	-2.8
2,336,742	-		CCNA_02185	0.40	-1.4
2,336,747	-		CCNA_02185	0.40	-3.3
2,336,747	-		CCNA_02185	0.40	-3.9
2,336,767	+		CCNA_02185	0.41	-2.4
2,336,770	-		CCNA_02185	0.41	-4.1
2,336,775	-		CCNA_02185	0.41	-1.9
2,336,780	-		CCNA_02185	0.42	-2.9
2,336,794	+		CCNA_02185	0.43	-2.5
2,336,882	-		CCNA_02185	0.47	-2.2
2,336,882	-		CCNA_02185	0.47	-3.2
2,336,980	+		CCNA_02185	0.53	-3.4
2,337,016	-		CCNA_02185	0.55	-3.4
2,337,072	-		CCNA_02185	0.58	-2.4
2,337,188	-		CCNA_02185	0.64	-2.5
2,337,218	+		CCNA_02185	0.66	-2.2
2,337,226	-		CCNA_02185	0.66	-4.1
2,337,228	+		CCNA_02185	0.67	-2.6
2,337,234	+		CCNA_02185	0.67	+2.4
2,337,234	+		CCNA_02185	0.67	-1.3
2,337,234	+		CCNA_02185	0.67	-0.9
2,337,234	+		CCNA_02185	0.67	-1.4
2,337,242	-		CCNA_02185	0.67	-4.1
2,337,242	-		CCNA_02185	0.67	-4.5
2,337,242	-		CCNA_02185	0.67	-4.4
2,337,243	+		CCNA_02185	0.67	+0.4
2,337,251	-		CCNA_02185	0.68	-3.1
2,337,252	-		CCNA_02185	0.68	-1.8
2,337,268	-		CCNA_02185	0.69	-3.0
2,337,276	+		CCNA_02185	0.69	-3.7
2,337,276	+		CCNA_02185	0.69	-3.3
2,337,276	+		CCNA_02185	0.69	-2.2
2,337,284	-		CCNA_02185	0.70	-3.3
2,337,284	-		CCNA_02185	0.70	-2.1
2,337,286	+		CCNA_02185	0.70	-0.9
2,337,326	+		CCNA_02185	0.72	-3.4
2,337,336	+		CCNA_02185	0.73	-3.5
2,337,344	-		CCNA_02185	0.73	-0.7
2,337,355	+		CCNA_02185	0.74	+0.8
2,337,411	-		CCNA_02185	0.77	-4.9
2,337,538	-		CCNA_02185	0.84	-2.2
2,337,552	+		CCNA_02185	0.84	-4.6
2,337,564	+		CCNA_02185	0.85	-2.6
2,337,572	-		CCNA_02185	0.86	-2.9
2,337,662	-				-0.7
2,337,702	-				-3.0
2,337,726	-				-0.7
2,337,726	-				-0.9
2,337,742	-				-4.2
2,337,776	-				+0.1
2,337,779	+				-2.7
2,337,789	-				-1.2
2,337,815	+				-0.9
2,337,825	+				-0.7
2,337,825	+				-2.1
2,337,825	+				+1.1
2,337,825	+				+0.3
2,337,825	+				-0.8
2,337,833	-				-1.6
2,337,833	-				-2.7
2,337,834	-				+1.1
2,337,835	+				+0.7
2,337,846	+				-0.6
2,337,849	-				-0.3
2,337,878	-				-0.1
2,337,907	+				-0.2
2,337,907	+				-0.3
2,337,915	-				-2.4
2,337,924	-				+0.6
2,337,928	-				+0.3
2,337,932	+		CCNA_02186	0.10	+1.1
2,337,935	-		CCNA_02186	0.11	-1.7
2,337,950	+		CCNA_02186	0.14	+0.6
2,337,982	+		CCNA_02186	0.19	-0.7
2,338,017	+		CCNA_02186	0.26	+0.0
2,338,034	+		CCNA_02186	0.29	-0.2
2,338,063	+		CCNA_02186	0.34	-0.2
2,338,084	+		CCNA_02186	0.38	-0.3
2,338,084	-		CCNA_02186	0.38	-1.0
2,338,108	+		CCNA_02186	0.42	-1.4
2,338,113	+		CCNA_02186	0.43	-0.8
2,338,119	+		CCNA_02186	0.44	+0.5
2,338,121	-		CCNA_02186	0.44	+0.5
2,338,127	-		CCNA_02186	0.45	+0.6
2,338,127	-		CCNA_02186	0.45	-0.8
2,338,137	-		CCNA_02186	0.47	+0.8
2,338,143	+		CCNA_02186	0.48	+2.4
2,338,152	-		CCNA_02186	0.50	-0.0
2,338,204	+		CCNA_02186	0.59	+0.4
2,338,209	+		CCNA_02186	0.60	+1.6
2,338,216	-		CCNA_02186	0.61	-0.6
2,338,236	-		CCNA_02186	0.65	-0.5
2,338,239	+		CCNA_02186	0.65	-0.3
2,338,239	+		CCNA_02186	0.65	-0.7
2,338,292	+		CCNA_02186	0.75	+0.4
2,338,294	+		CCNA_02186	0.75	+0.1
2,338,294	-		CCNA_02186	0.75	+2.4
2,338,319	+		CCNA_02186	0.80	+0.1
2,338,324	+		CCNA_02186	0.81	-0.1
2,338,327	-				+0.4
2,338,337	-		CCNA_02186	0.83	+0.2
2,338,337	-		CCNA_02186	0.83	-0.9
2,338,346	+		CCNA_02186	0.85	+0.2
2,338,364	+		CCNA_02186	0.88	-0.2
2,338,364	+		CCNA_02186	0.88	+0.2
2,338,364	+		CCNA_02186	0.88	+0.2
2,338,378	-				-0.3
2,338,381	-				+0.2
2,338,381	-				-0.8
2,338,383	+				+0.2
2,338,423	-				-0.2
2,338,423	-				-1.2
2,338,430	+				-1.0
2,338,438	-				-1.1
2,338,441	+				+0.3
2,338,441	+				+0.9
2,338,456	+				+4.4
2,338,458	+				+0.2
2,338,464	+				+0.1
2,338,465	-				-0.3
2,338,638	+				-0.4
2,338,638	+				+0.6
2,338,825	+				+0.5