Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0004

Experiment: Def methylglyoxal 0.01 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def methylglyoxal 0.01 vol%
3,245	-				-0.7
3,258	+				-3.0
3,258	+				-0.0
3,258	+				-0.2
3,258	+				-0.5
3,258	+				+0.6
3,259	-				-3.7
3,259	-				-1.5
3,316	-				-1.6
3,332	-				-1.6
3,446	+		Psest_0004	0.17	-2.8
3,446	+		Psest_0004	0.17	-0.8
3,447	-		Psest_0004	0.17	-1.5
3,447	-		Psest_0004	0.17	+0.4
3,447	-		Psest_0004	0.17	-0.7
3,447	-		Psest_0004	0.17	-1.3
3,447	-		Psest_0004	0.17	-2.6
3,447	-		Psest_0004	0.17	-1.2
3,540	+		Psest_0004	0.25	-3.1
3,540	+		Psest_0004	0.25	-0.8
3,540	+		Psest_0004	0.25	-1.4
3,541	-		Psest_0004	0.25	-2.6
3,541	-		Psest_0004	0.25	-0.9
3,541	-		Psest_0004	0.25	-1.9
3,613	+		Psest_0004	0.32	-2.2
3,622	+		Psest_0004	0.33	-0.7
3,622	+		Psest_0004	0.33	-0.9
3,622	+		Psest_0004	0.33	-1.7
3,766	+		Psest_0004	0.45	-2.3
3,766	+		Psest_0004	0.45	-1.9
3,848	+		Psest_0004	0.53	-1.3
3,848	+		Psest_0004	0.53	-1.0
3,848	+		Psest_0004	0.53	-0.7
3,848	+		Psest_0004	0.53	-0.6
3,848	+		Psest_0004	0.53	-0.6
3,848	+		Psest_0004	0.53	-2.4
3,848	+		Psest_0004	0.53	-2.3
3,848	+		Psest_0004	0.53	-0.6
3,849	-		Psest_0004	0.53	-2.8
3,923	+		Psest_0004	0.60	-1.7
3,923	+		Psest_0004	0.60	-1.5
3,923	+		Psest_0004	0.60	-1.1
4,004	-		Psest_0004	0.67	-1.2
4,107	+		Psest_0004	0.76	-1.2
4,107	+		Psest_0004	0.76	-1.8
4,107	+		Psest_0004	0.76	-1.2
4,111	+		Psest_0004	0.76	-0.9
4,111	+		Psest_0004	0.76	-1.2
4,111	+		Psest_0004	0.76	-3.1
4,111	+		Psest_0004	0.76	-0.7
4,111	+		Psest_0004	0.76	-1.5
4,112	-		Psest_0004	0.77	+0.2
4,160	+		Psest_0004	0.81	-1.0
4,160	+		Psest_0004	0.81	-1.4
4,260	+		Psest_0004	0.90	-1.8